Xiphophorus maculatus (southern platyfish): 102237590
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Entry
102237590 CDS
T02923
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102237590
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102237590
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
102237590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
102237590
NCBI-ProteinID:
XP_005796385
Ensembl:
ENSXMAG00000017273
UniProt:
A0A3B5REJ1
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All DBs
Position
2:21492482..21553329
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AA seq
763 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGKELSKSSHDETVEAFRAARDPVVVQVIRRTPSGR
PHGPPQEIHVVDVCTQTDITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQDYY
EGTDYLSPVPADGDRMEEFEYEEVELCRLSCHEKLGLTLCYRTDEEEDVAIYVSEVSPNG
IAARDGRIREGDRILQINGHDVQDREEAMAALSSDDFKNIVLLVARPEMQLEEAWLDDEH
SEFLEQLKMEMLEEQQREEMELAALQEEQEKQQRSEDDKPSCSTFSYSRDSLQSLKERKE
NSDHNVLAQIQRRLSRCLRDSQDSHCTSGSKRLEDKDDEDNDESEGDRFQQLLELKCQIR
NSGEYDLFYSRRSTIECSMAEQSDVQHELRMLNEELRSIELECQNIMQAHKLRKSQQSPL
MGRSAPSIKSQSPKHGESIKGKLGDINERMEKSDKDSSSAYNTAESSRSTPLAMDRSPEH
SLQRMVSLTNQRNLYGGFAAGHSQSPSPLPTCRTPVLGKSSSPDHSNPSESDQTPQAEEE
GKRKLKQCTSRIPYFSPSHTSQQRQANIPAHARHYQSYMQLIQQRSAVEYAQSQLSLLSV
CKEPQRPINEPKMEWKVKIRSDGTRYITKRPVRDKILRERALKIKEERSGGMTTDDDAMS
EMKMGRYWSKEERKQHLVRAKEQRRRREFMQRSRLESLKENPQSSSEGRKEVSIIELSHK
KMLKKRNKKILDNWMTIQELMTHGTKAPEGAKVHNAFLSVTTV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttacagaagcgagaggaacactacaagctgctgtatgag
attgcacaggtgaatgggaaggagttgtccaaatccagccacgatgagactgtggaggcc
ttccgagctgccagggaccccgtcgtggtgcaggtcatcaggcgtaccccgagcggccgc
ccccacggcccccctcaggaaatccatgtggtggatgtgtgcactcagaccgacatcacc
tttgaacacatcatggcgctggcaaagctccggccttcaacccctcctgtgcctgacgtc
tgtcccttcctgctctctgacagctgtcattcccttcatacaatggaccaagattactat
gaaggtaccgactacctctcccccgtcccagctgacggagacagaatggaggagtttgag
tacgaggaagtcgaactttgtcgtctcagctgtcatgaaaaactaggcctcactctgtgc
tatcgaacggatgaagaagaggatgtggccatctatgtcagtgaggtcagtccgaacggc
attgccgccagagacggacggatccgagaaggggatcgaatcttacagataaacggccat
gatgtgcaagacagagaagaagcaatggctgctctctccagtgatgacttcaagaacatc
gtactactggtcgcccgacctgagatgcagctggaagaggcttggctggatgatgagcat
agcgagttcctggagcagctgaagatggaaatgttggaggagcagcagagagaggagatg
gaattagctgcattacaagaagaacaggaaaagcagcagagatccgaagatgacaagcct
tcttgttcaacattttcttactcaagagacagcctgcaaagtctgaaagagagaaaagaa
aactcagaccacaacgtcttagcccaaatccagagacgcctgtcccggtgcctacgggac
agtcaggactcccattgtaccagtggtagcaagcgactggaggacaaagacgatgaggac
aatgatgagtcagagggagatcgtttccagcaacttttggagctaaaatgtcagatacgc
aacagtggcgagtacgaccttttctacagccgccgcagtactattgagtgcagcatggcg
gaacagagcgatgtgcaacatgagctgcgtatgctaaatgaggagctacgcagtattgaa
cttgagtgtcagaacattatgcaggcccataagctgcgcaagagtcagcaatctccctta
atgggacgttctgcaccctccatcaaaagtcaaagccccaaacatggagagtctattaag
gggaagctgggggacattaatgagaggatggaaaagtctgacaaggacagctccagtgcc
tacaacactgccgagagttctcggagcacgcccttggcgatggaccgctccccagagcac
tctctccagagaatggtcagtctcaccaaccagaggaacctctatggcggctttgctgcc
ggtcactcacagagcccaagccccttaccgacctgcagaacccccgttctgggcaaaagc
agcagccccgaccacagtaacccttcagagtcagatcagacacctcaggctgaggaggag
ggtaaaagaaagttaaaacaatgcacttcccggattccttacttctctccttcccacaca
tcccagcagaggcaggccaacattccagcccatgcccgtcactaccagagctacatgcag
ctgatccagcagcgttcagctgttgagtatgctcagagccagctcagcctgcttagtgtc
tgcaaagagcctcagagacccattaatgaacctaagatggagtggaaagtcaagatccgc
agcgatggcacccgctacatcaccaagaggccagtgagagacaagatcctgagggagcgg
gccttgaagattaaagaggaacgcagtggggggatgacgacggatgacgatgcaatgagt
gagatgaagatggggaggtactggagtaaagaggaaaggaaacagcacctggtcagagca
aaagaacagaggagaagacgagaattcatgcagcgtagtcggctggaaagcttgaaggag
aaccctcagagcagcagcgaaggtcgaaaggaagtcagtattatagagctcagccacaag
aagatgctgaagaaacgcaataagaagattttggacaattggatgaccatccaggagctg
atgacacacggcactaaggcccccgagggagcaaaggtgcataatgccttcctctcagtc
actactgtatag
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