Xiphophorus maculatus (southern platyfish): 102237599
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Entry
102237599 CDS
T02923
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102237599 (trpc1)
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102237599 (trpc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
102237599
NCBI-ProteinID:
XP_005798650
Ensembl:
ENSXMAG00000002645
LinkDB
All DBs
Position
21:complement(9169983..9186977)
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AA seq
799 aa
AA seq
DB search
MHISAWPYSLSVVMAALYQGTDTSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNSVDVLGRDAVTIAIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMGTVLSLALLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFTLKIVAHSKFKN
DPDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDHAKDTKDQFKQTKDCEGIFCQQQSNDAFHTFMGTCYAL
FWYIFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIAN
HEDKEWKFARAKLWLSYFDDKCTLPPPLNILTSPKTVCYLVTSLRKWICSHTTKGKVKRQ
NSLKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENLNDLRQDLSKFRNE
MRDLLGFRTSKYAMFYPRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacacctcctcccccgacaaattcctggccttgaaagacgtgagagaagtgaaagag
gagacgacgctggacgagaagctcttcctgctggcatgcgagaaaggtgactactacatg
gtgaagaagctgctggaggagaaccgccacggggagctcaacgtcaactctgtggatgtg
ctgggccgggatgcggtgaccatcgctatcgagaacgaaaacctggacattctgcagctt
ctgctcgagcacggctgccaggccacagatgccttgcttgtggccatagactcggaggtg
gtgggtgctgtggacatcctcctcaaccacagaccaagacgctcctccaagccctctatt
gctaaactgatgcagcggatccagaacccagagtactccaccaccatggatgtggctcct
gtaatcctggcagcacacagaaataattatgagatcctcaccatgctgctaaaacaggat
atctccctccctcggcctcacgctgtaggctgcgagtgcatgctgtgcaatgctaaaaac
aagaaggacagcttaaggcactccaggttccgactcgacatctatcgctgcctggcgagc
ccctctcttatcatgctgaccgaggaggaccccatactacgagcatttgagcttagcgca
gacctgaaggagctcagccttgtcgaggttgaattcaggaatgactacgaagaactggcg
aaacagtgcaaaatgtttgccaaggatcttctggctcaggctcgaaactctcgagagctg
gaagtgattctcaatcacacctccagcgaagatcatgttgacaagaggggcctgctggag
gagcgcatgaaccttagccggcttaagctagccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcagcagttcctcaacaccgtctggttcggagagatggccagctac
cgacggaagcacacctgtttgaagatgggcacggtcctgagcctggctctgctctggccg
ctcctctctgtgtgctacctgctggtgccccgctcccgagtcggccagataatccacacg
ccgtttgtgaagttcatcatccacagcgcctcctatttcacctttctgctcctgctcaac
ctgtattctctggtctacaatgagggcaagaagaacacgatgggccccgcactcgagatg
attgattacctgctgatcctctggatcataggaatggtgtggtcggacgtgaaacgtttg
tggtacgaagggctggaagactttctggaagagtccaggaaccagctgagttttgtgatg
aattctctctacctggcaaccttcactcttaaaatagttgctcatagcaagttcaaaaat
gatccagacacagagaggaagaactgggacgccttccatcccatcctggttgctgagggc
ctcttcgccttcgccaatgttctgagttacctgagactcttcttcatgtacaccaccagc
tccattctggggccactgcagatttccatgggtcagatgctgcaggagtttggaaagttt
ctgggcctcttcctgcttgtgttattctccttcaccattgggctgacccagctctatgga
aaagaccatgctaaagacacaaaggaccagtttaagcaaaccaaggactgtgagggcatc
ttctgccagcaacagagcaacgatgcgtttcacacgtttatggggacctgctatgctctg
ttctggtacattttctccttggcgcacgtcgcgctcttcgtcacccgcatcagctacaca
gaggagctgcgctcctttgttggtgccctgatcataggcacctacaacattgtggtggtt
atcgtgctgaccaaactgctcgtggccatgctccataaaagtttcagacaaattgctaat
catgaggataaggagtggaagtttgcacgggccaaactgtggctcagctactttgacgac
aagtgtaccctgcccccacctctcaatatcctaacctcaccaaaaaccgtctgctacctg
gtgaccagcctaaggaagtggatctgttctcacactacaaagggcaaagtgaagagacag
aacagtctcaaggagtggaagaacctgaaacagaagcgtgatgagaactaccagaagatc
atgtgctgtctagtacaccgctacctgacctccacgaggcagaagatgcagagcatggat
caagccacggtggaaaatctgaacgacctacgccaagacctgtccaaatttcgcaacgag
atgagggacctgctgggcttccggacatccaaatacgccatgttctacccaaggagctaa
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