Xiphophorus maculatus (southern platyfish): 102237631
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Entry
102237631 CDS
T02923
Symbol
cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102237631 (cthrc1)
Cilium and associated proteins [BR:
xma03037
]
Other cilia and associated proteins
Stereociliary proteins
102237631 (cthrc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
102237631
NCBI-ProteinID:
XP_005807558
Ensembl:
ENSXMAG00000004030
UniProt:
A0A3B5R2D6
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All DBs
Position
3:27881622..27889322
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AA seq
229 aa
AA seq
DB search
MSPLASRLLVLLCLALPLYGVEKVKNRGYRKEPDVDKYGSCMQGPAGTPGRDGNPGANGI
PGTPGIPGRDGLKGEKGECVSEIFEEPWRPNYKQCAWNALNYGIDLGKVADCTFTKLRSD
SALRVLFSGSLRLKCKNACCQRWYFTFNGAECTGPLPVESIIYLDQGSPELNSTINIHRT
SSVEGLCEGVKAGLVDVAVWVGTCADYPRGDASTGWNSVSRIIIEELPK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctggcgagccgcctgctcgtcctcctctgcctggcgttgcctctttacggc
gtggaaaaggtgaaaaacagaggataccgaaaggaacccgacgttgacaagtatggcagc
tgcatgcaaggcccagcaggaacccctggaagagacggcaaccccggagccaacggcatt
ccaggcacgccgggcatcccgggccgtgacgggctcaaaggtgaaaaaggggaatgcgtg
agcgagatctttgaggaaccctggaggcccaactacaagcagtgcgcctggaacgcactg
aattatgggatcgacctgggtaaagtggcggactgcacgttcaccaagctgcgctcggac
agcgctctcagagtcctcttcagcggttccctgcgactcaagtgcaagaacgcctgctgc
cagcggtggtacttcaccttcaacggggccgagtgcacgggacccctgccagtggagtca
atcatctacttggaccaggggagtccggagctcaactccactatcaacatccacagaaca
tcctcagtcgaggggctgtgcgagggcgtcaaggcagggttggtggacgtggcggtgtgg
gtggggacctgcgccgattatccccggggagacgcttccacggggtggaattctgtgtcc
aggatcatcatagaggagctgcctaaatga
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