Xiphophorus maculatus (southern platyfish): 102237761
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Entry
102237761 CDS
T02923
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102237761 (tbc1d2)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102237761 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_3
PH_8
PH_alsin
LMBR1
Motif
Other DBs
NCBI-GeneID:
102237761
NCBI-ProteinID:
XP_023183881
Ensembl:
ENSXMAG00000003832
LinkDB
All DBs
Position
23:369260..385358
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AA seq
1118 aa
AA seq
DB search
MAGRQNIKSVITSRYVKTHVTQPRAFTPALTSLWKRDFSCSYFEVKSGSWVCLGRSGAGA
AGHEPLREGRETQTPTGKQQQQQPIRTAGCRPLRMDGGSPASDSLPVPTDPVRMGPDSQN
QEAVHSGPDCLSGSAEPPSSPQSTRPEPSGSEQTEPGDSAGPESAPETSSGPVLQNLEAS
TDQVEEEPGSDPSEVLTAGPEEPGVHQNLQCSEELHQNPGEVLSAEEGGSAASCLGRPGR
TECLDLQNRQAPPPGSQVWPRPPGAAGEPRLCGFLQKQAGPLRAWKRRWFSYEQNQNQLF
YFRSPQDVAPLGRIRLSGATFTCPLNAESGTFHIQTPERTFILKAVSQELMLYWLQQLQV
KRWQHRDTSTGPDRTNTNNNNLTDDFLPRQHGPVGLVGEAAAVAPAQRSTLASVSIKHPF
IQIQNSVHSLRKRTSQDSSQSSVFYTDVLPWTETGPEDGGAPADDAAGQRSASPSLSWRS
KSRVSSSVSVPCGVAASSERTSRLQQDKQMLMEEVKAQKELVWILHKALEASQLEKRSCS
EFLAAQDEQRRLELLRHGERLAADLRARLDGAKMEAEALRRRLDDRDAQLAELQEEVRLL
EEKNAAKQQVIMKLTDQVTSCLSDFSGSDQNQNHQNHKQLQQQMENLKDDLAAYQTQNRF
LNSEIYQLTKLWRKSSEQERSLMVKCAYLEATNCQMESRYLGVLRRLQEAKALAPEQQEA
VQRLIQDALGREAKGVVKLSADRDHDEYGFKIVPDYEVEDMKLLAKIQALEIRGHSLLQQ
DSMERPLLARWAQYLAGRSEDDLCPSPELKALLRSGVPQQYRQRVWRWLVRTRTRTVWER
HPQRYQQLCEKSRTSPHPACRQIQLDLHRTLTTNQNFSSPSSPALQQLRRVLLAFSWQNP
AVGYCQGLNRLAAVALLVLQSEEDAFWCLVALVDAIMPQDYYTKNLLASQADQRVLKDFM
AEKLPRLAAHLEGHGVDVSLVTFNWFLVVFVESLPSDILLPLWDAFLYEGSKVIFRFALA
LFKYKEDDLLKIHDNVEIYQYLRFFTKTVTDSRKLAAIAFCDMNPFPRRLLRNRRALHLE
RLQGELQELEEQQKEFVTESAERKDKELDPASEDDDEL
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccgtcagaacataaaatcagtgatcacttcaagatatgtgaagacccacgtg
actcagccccgcgcctttactccagctctgacgtcgctctggaagcgggacttttcctgc
tcttattttgaagtgaagagcggaagttgggtgtgtttgggtcggagcggagcgggagcg
gcgggacacgagccgctgagagaggggcgcgagacacaaacaccaacaggtaaacaacaa
cagcagcagccaatcagaaccgccgggtgccgcccactcaggatggacggaggaagtccc
gcctccgactcacttcctgttcccaccgacccggtccggatgggtccagactctcagaac
caggaggcggttcatagcggacccgactgcctgtctgggtcagcagaacctccttcaagc
ccacaatcaaccagaccagaaccttctggttctgagcagacggaaccaggagattctgca
ggaccagaatcagcgccagaaacaagttcaggcccggttctccagaacctagaagcctct
acagatcaagttgaggaggaacccggttctgatccatctgaggttctgactgcaggacca
gaggaacctggagtccatcagaacctgcagtgttcagaagaactccatcagaaccctggt
gaggttctgtcggcagaggaaggcggttctgctgcgtcctgtttgggtcgacccggccgt
acggagtgtctggacctccagaaccgtcaggccccgccccccggcagccaggtgtggccc
cgtccccctggcgctgcaggtgagcccagactgtgcggcttcctgcagaagcaggcgggg
cccctgagggcctggaagcggcgctggttcagctacgaacagaaccagaaccagctgttc
tacttccgctcaccgcaggatgtggcgccgctgggccggatccgactgagcggcgccacc
ttcacctgtccgttgaacgccgagagcggcaccttccatatccagacgcccgaacgcacc
ttcatcctcaaggcggtgagtcaggagctgatgctgtactggctgcagcagctgcaggtg
aagcgctggcagcaccgtgacacgtctactggaccggaccggaccaacaccaacaacaac
aacctgacagacgacttcctgccgaggcagcatggtcctgtgggcctggtgggggaggcg
gcggccgtcgctccggcccagcgctcgacgcttgccagcgtctccatcaaacacccgttc
atccagatccagaactcggtccacagtctgaggaagagaacgtctcaggactccagtcag
agctcagtgttctacaccgatgttctgccctggaccgaaaccgggccggaggacggaggc
gcccccgcagatgacgccgcaggtcagaggtcggcgtctccgtccctcagctggaggtcc
aagtcccgggtctcgtcctccgtgtcggtcccctgcggggtcgcggcgtcctcggagcgg
acgtcccgcctgcagcaggacaagcagatgctgatggaggaggtcaaggctcagaaggag
ctggtctggatcctccacaaggccctggaggcgtcgcagctggagaagcgcagctgcagc
gagttcctggcggcgcaggacgagcagcggcgcctggagctgctgcggcacggcgagcgg
ctggcggcggacctgagggcccggctggacggcgccaagatggaggccgaggcgctgagg
cgtcgcctggacgacagagacgctcagctggccgagctgcaggaagaggtcaggctgctg
gaggagaagaacgccgccaagcagcaggtgatcatgaagctgactgatcaggtgacctcc
tgcctgtcggacttctctggttccgaccagaaccagaaccatcagaaccacaagcagctc
cagcagcagatggagaatctcaaggacgacttggcggcgtatcaaacccagaaccggttc
ctgaactctgagatctaccagctgaccaaactgtggaggaaaagctccgagcaggagagg
agcctgatggtgaagtgtgcgtacctggaggccaccaactgccagatggagagccgttac
ctgggcgtcctgcggaggctgcaggaggccaaagctctggctccggagcagcaggaggcc
gtgcagcggctgatccaggacgccctgggaagagaggccaagggcgtcgtgaagctgagc
gcagacagggatcacgacgagtacggctttaagatcgtccccgactacgaggtggaggac
atgaagctgctggccaagatccaggcgctggagatccggggccacagcctgctgcagcag
gacagcatggagcgccccctgctggcccgctgggcgcagtacctggccggccgttctgag
gacgacctgtgtccgtctccggagctcaaggctctgctgcgctccggcgtccctcagcag
taccggcagagagtgtggcgctggctggtccggaccagaaccagaaccgtctgggagcgc
cacccccagcggtaccagcagctgtgtgagaagagccggacgtcgccgcacccggcctgc
aggcagatccagctggacctgcacagaaccctgaccaccaatcagaacttctcctcgccc
tcaagccccgccctccagcagctgcgccgcgtcctgctggcgttctcctggcagaacccg
gcggtcggctactgccagggtcttaacaggctggcggccgtcgccctactggtactgcag
agcgaggaagacgccttctggtgcctggtggcgctggtggacgccatcatgcctcaggac
tactacaccaagaacctgctggcctctcaggccgaccagcgggtcctgaaggacttcatg
gcagagaaactcccccggctggcggcgcacctggagggtcacggggttgacgtgtcgctg
gtcaccttcaactggttcctggtcgtcttcgtggagagtctgcccagcgacatcctgctg
ccactgtgggatgccttcctgtacgagggctccaaggtgatcttcaggttcgctttggct
ctgttcaagtacaaagaagacgacctgctgaagatccacgacaacgtggagatctaccag
tacctgcgcttcttcaccaagaccgtcaccgacagcaggaagttggcggccattgctttc
tgtgacatgaacccgttcccgcggcgcctgctgaggaaccggcgcgcgctgcacctggag
cgcctgcagggggagctgcaggagctggaggagcagcagaaggagtttgtgacagagagc
gccgagcggaaagacaaggagctggacccggccagcgaagacgatgacgagctttaa
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