Xiphophorus maculatus (southern platyfish): 102237785
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Entry
102237785 CDS
T02923
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102237785
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102237785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
HTH_31
HTH_26
CUT
AbiJ_NTD3
HTH_24
HTH_37
SR-25
Motif
Other DBs
NCBI-GeneID:
102237785
NCBI-ProteinID:
XP_014325543
Ensembl:
ENSXMAG00000011675
LinkDB
All DBs
Position
4:complement(29438528..29452377)
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AA seq
500 aa
AA seq
DB search
MFQQSEEPRFTIEQIDLLQRLRRTGITQVEVLHALDTLDHLDQQNGHKQARKASYLPPSS
SLSSSNSVSASSSTTCASTQTVFPDNRLSLSPGNNLDTASPPLPVPTASPVVVQNGLGAV
ANGKLSPPRFPLVGGSVTAPGFGFEASEEDLDLDDKVEFLMRRDSSVIKEEIKSFLANRR
ISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKTNPGATLAMRAAPLAL
EDMMDWHQTPPPFASAPGGFRLRRGSRFTWRKECLAVMESYFSDNQYPDEAKREEIATAC
NAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVESPGGQSNG
DEVDGNDFPDQGCDVSLFDKRASARQFGFSRADLSSPTQVPPQLPSWFSALARGGQRGAS
LIGRSLLSGAGSQAEGSRMTGASWSPPSPSLQDDPGLHVVLSEPQDPATSEKTAAGRGSP
ASANQADAGNQIKTESVDDD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagagtgaggagcctcgcttcaccatcgaacagatcgatctcctccagagg
ctccgacggaccggcattactcaggtggaggtcctccacgccctggacacgctcgatcac
ctggaccaacagaatggccacaagcaggcccgcaaagcttcctacctgccgccctcgtct
tccttgtcttcctccaactccgtctctgcctcttcgtccaccacttgcgcctccactcag
acggtttttccggacaaccgactctccctgtcacctggcaacaacttggacaccgcctcc
ccgcctctgccggtcccgacagcctcgccggttgttgtccagaatggacttggcgccgtc
gccaacgggaagctttctccgccgcggtttcctctggtcggaggcagcgtgactgcaccg
ggctttgggtttgaggccagtgaggaagacttggatctggatgataaagtggagttcttg
atgaggagggacagcagtgtgatcaaagaggagatcaagtccttcctggcgaacagacgg
atctcccaggccgtggttgctcaggtaacagggatcagtcagagtcggatctcccactgg
ctcctccagcaggggtcggacctcagcgagcagaagaaacgggccttctttcgctggtac
cagctggagaagacgaaccccggcgccactctggccatgcgggcggccccgctggctctg
gaggatatgatggactggcaccagacccccccaccgttcgcctcggcccctgggggcttc
cggctgagacggggcagcagattcacctggaggaaggagtgtctggctgtcatggagagc
tacttcagtgataaccagtatcccgacgaagcaaagagggaggagattgccactgcctgc
aatgctgtcattcaaaaaccaggaaagaagctgtctgatttggagagagttacgtctctc
aaggtctacaactggttcgccaaccgccgtaaagacatcaagaggcgtgccaacatagaa
gcagccatcttagagagccatggcatcgaggtcgaaagtccaggaggccagtccaacggc
gacgaggtggacggcaacgacttccctgaccagggttgcgacgtgtccctgtttgacaag
agagcttcggccaggcagtttggctttagtcgagctgacctgtcctctcccacccaggtt
ccgccgcagctgcccagctggttctccgccctggccaggggaggccagcggggcgcctcg
ctgatcggtcgctccctcctgtctggggcgggctctcaggcagaaggatccagaatgacg
ggcgcgtcctggtcccccccgtccccgtccctccaggacgaccccggcctccacgtcgtg
ctctccgaaccgcaggacccggcgacgtcggagaagacggcggccggccgcggcagcccg
gcctcagccaatcaggcggacgcggggaatcagatcaagacggaaagcgtggatgacgac
tga
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