Xiphophorus maculatus (southern platyfish): 102237818
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Entry
102237818 CDS
T02923
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102237818 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102237818 (usp42)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102237818 (usp42)
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102237818 (usp42)
Ubiquitin system [BR:
xma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102237818 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102237818
NCBI-ProteinID:
XP_014329057
LinkDB
All DBs
Position
10:complement(23730898..23746897)
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AA seq
1171 aa
AA seq
DB search
MTIVDRLSEKSDHESVGFNRSFTSGDVGMDGSCSSSWAVGPSMPGDSPRLKPSGGCLGPT
PGAAVYNGTPASMDRPKDHVMSSEDGIELPQKVLFPPERLSLKWIQVHRIGAGLQNMGNT
CFLNSALQCLTYTPPLANFMLSREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIGV
LNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLRS
RVKCLNCKSVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVTA
SKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPEYLELRPFMSQSQGEPQIYGLYAVL
VHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSCNVKKTGE
FSNMSHNPGMSGQSSPRPVVTPRIHTAVHHGNTGFIGPQLPPHMTKNTLHVNGNGSLRDY
PSSSKASSSAVGKPSHGLASSSISRPTSIPDQEKRQKLSFFIGQGKQNRASSSSAYSHPS
SASSSSSSSLSSSQSTSDVHFVPRQLNHFNGTPSSNGDQPARGNGSSLLVPYSQESSEES
DQENGTTQDAGCISKPQTKGTNGTGDVCASSSKNTNGEIDVCYNSSEVNGSTSEFTKTNQ
NGQFNGHHKVNGHNTHEKGSIHNQDSSAVNAVANGLGSDHNEPNKELVDPASSQTCSAQS
APPAANEREPLSAAVDERAKTLPEPLPPPHHTSSSPVSSSPSATTSKTHAVAPRDLSAFP
SEPVCCQSVNGISTAAQNISKTEEEVKDSSQTNGPSARTDGGTENKGQSQSKPGSRGHER
QSSHDRDRDRFYSDYSKDRDKHYRDRSPPRESYSDRHRYRRDYRDHHRSYRDRFPPERSY
WDFDRRKERLGSHSWEHDRDRRSYHSSHYYHKYDGSHERRGYPQPQECHSYWRSQKDGRE
SWAMKDKRNGWDREERSSSPAATALEINKSKVSPPWDRLCNFNSTLKREEPSDKRPAAHL
RKEREDSSEGRRSKKHKKSKKKKKSKDKDMHHESSSDPDSDRATESRKKKKKKRRHRDSD
SDSGRGHTNRSSKERENRKRHHSDTKDSRYDKDFLPEKRQRTDCSDGSRDQPLPPHHNAL
SNHSAHQHLNGHTGNGRTNGDFHGCSSGLKQ
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagattgtcagaaaaatctgaccacgagtcagttggatttaaccga
tccttcaccagtggagacgtggggatggacggcagttgttccagcagctgggctgtgggt
cccagcatgcccggtgactctcctaggcttaagccttcaggaggctgcctgggtccgacc
cccggtgctgccgtctataacggcacacccgcctctatggaccgccccaaggaccatgtg
atgagcagtgaagatggcatagagctgcctcagaaggtcctgtttcctccagagcggctc
agcctgaagtggatccaagttcaccgcattggtgccggcctgcagaacatggggaacaca
tgcttcctcaactcagccctgcagtgcctcacctacactccaccgctagccaatttcatg
ctgtcaagggagcactccaaaacctgtcatgagcctggattctgcatgatgtgcaccatg
caaaaccacatcattcaggtttttgctaactctgggaatgtcattaagcccatcggtgtc
ctcaatgagcttaaaagaattgcaaagcacttccgctatggaagccaggaggatgctcat
gagttcctgcggtacacagtggacgctatgcaaaagtcctgcttacctggaaccaaattg
gacaggcaaacgcaggccaccactttcatccatcaagtgtttggagggtacctcaggtcc
agagtgaaatgtctgaactgcaaatcagtttctgatacatttgatccttttctggacatc
acgctggaaattaagacagcacccagtgtctccaaagctctggagcaatttgtcaaacca
gaacagctggatggagaaaacgcctacaagtgcaccaagtgcaaaaaaatggttacagcc
tcaaagagattcacaatccaccgcagtcctaatgtgctcactctctcactaaaacgattt
gcaaacttcactggaggaaaaatcacaaaggatgttaaatatccagagtacctggagctg
cggcccttcatgtcccagtctcaaggagagcctcagatctacggcctgtacgctgtgctg
gtccactccggcttcagctgccacgctggccattacttctgctacattaaggccagcaac
ggtcagtggtaccagatgaacgactcgtctgtctctgtgagcgacatccgctcagtcctc
aaccaacaggcctacgtccttttctacattaagtcgtgtaatgtgaagaaaactggggaa
ttcagcaacatgagccataacccaggtatgtctggtcagtcgtctccccggccggtggta
actcctcgtatccacaccgccgttcaccacggcaacactggcttcatcggcccccaacta
ccaccacacatgaccaagaacactctccatgttaatgggaatgggtctttgagggactat
cccagcagttctaaggccagcagcagtgcagttggcaaacccagccacggcctggcttct
tcctcaatcagccgacccacatccatcccagaccaagagaaacgacagaagctttcgttt
tttattggacaaggcaaacagaaccgagcatcttcctcatccgcctacagccacccatcc
tctgcaagcagctcctcctccagctcgttatcttcctcgcagtctacctcagacgttcac
tttgttccgcgtcagctaaaccactttaacggcacacccagcagtaacggcgaccaaccc
gccaggggcaacgggtcgtctttactggtgccgtacagtcaagagtcctctgaagaatcc
gaccaggagaacggtaccactcaggatgctggctgcatatccaagcctcagacgaaggga
actaatggaacaggagatgtgtgtgcctcttcttctaaaaacacaaatggtgaaatagat
gtctgttataacagcagtgaagtgaatgggtcaacctctgaatttacgaaaacaaaccaa
aatggacaatttaatgggcaccacaaagttaacggacacaacacacatgagaagggatcc
atccataatcaggacagttcagctgtgaatgctgttgccaatggacttggcagtgaccac
aatgaacccaacaaagagctggttgacccggcctcatcgcagacctgttcagctcagagc
gctcctcctgctgctaatgaaagagagcccctctctgctgctgttgatgaaagggctaaa
acgctgcctgaacctcttcctcctcctcaccacacctcatcctctcctgttagctcctca
ccttcagctactacttccaagacgcacgctgttgcacccagagacctgtcagccttcccc
tcagagccagtctgctgtcaaagtgttaatgggatctctacagctgctcagaacattagc
aaaaccgaggaagaagttaaggattcctcgcagaccaacggtccatcagcacggacagac
ggtggtacagagaacaaggggcagagccagtccaagcccggttctagaggccatgaaagg
cagtcctcccatgacagggacagagacagattctactctgactatagcaaagacagagac
aaacactacagggacagaagtccaccacgagaaagttacagcgatcgccatcggtatagg
cgagactaccgggatcaccatcgctcctacagggatcgatttcctcccgaacggagctac
tgggacttcgaccgccgcaaggaacgactcggctcgcactcctgggagcacgaccgcgac
cggcgctcgtaccattccagccattactaccacaagtatgatgggagccatgagaggagg
ggatacccacaacctcaagagtgtcacagctactggcggtcgcaaaaggacggtcgggaa
tcctgggcaatgaaggacaaaaggaatgggtgggatagggaagaaaggagttcctcccca
gctgctactgctctagaaataaacaagtccaaggtttcccccccctgggaccgcctctgt
aattttaactccactcttaagagggaggagccgagtgacaagaggccagctgctcatcta
agaaaggagagagaggacagctcagagggccgccgctccaaaaaacacaaaaaaagcaag
aagaaaaagaagtcaaaagataaagacatgcaccacgagagcagctctgacccggattca
gacagagccaccgagagcaggaagaagaaaaagaagaagaggcggcacagggacagcgac
tccgattccggacggggccacaccaacagaagcagcaaagaaagagagaaccggaagcgc
catcactctgacaccaaggactccaggtatgacaaagactttttaccggagaaacgtcag
cgcacagactgcagcgatggcagcagggaccagcctctcccacctcaccacaacgccctc
tcaaaccattcagctcaccaacatctcaacggacacacaggaaatggtcgaaccaacggt
gacttccacggatgctccagtggcctcaagcagtga
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integrated database retrieval system
