Xiphophorus maculatus (southern platyfish): 102237982
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Entry
102237982 CDS
T02923
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102237982
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102237982
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102237982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
KH_PNO1_2nd
ResIII
MOEP19
KH_2
KH-I_KHDC4-BBP
CMS1
Motif
Other DBs
NCBI-GeneID:
102237982
NCBI-ProteinID:
XP_023182740
Ensembl:
ENSXMAG00000017126
LinkDB
All DBs
Position
22:complement(22568638..22578969)
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AA seq
703 aa
AA seq
DB search
MSDWEDEYDECGVAIEKPAPNLSATNSTLLGKDSQGHGSVYSGIKTQTWFREPSEARVES
RRDAFEFRSRRGETDRGEGPEDRRRGSEVSDGSQPLTFKVENMSIGRIIGRGGAKIRELE
ESSGARIKITRGDYDGDVAISGSSAAQEKARELIEDLILGISSQFSYAPARGLYSDVEMF
EGRSVTGINRNNSAWSKEAPQAASDGPASSVIDWNDIRQNRKKFEELKWKELPPLKKNFY
TEAVSVSMLTPDEVAAWRKENNNIFVDDIKEEGEKRPIPNPCRTFLEAFQPYPEIMENIE
RVGFVKPTPIQSQAWPVLLIGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVLRAERGGPG
MLVLTPTRELALQIEAECSKYSFKGYKSICVYGGGDRRGQINLVKSGVDIVIATPGRLND
LQMNNLINLHSITYLVLDEADRMLDMGFEPQILKILLDIRPDRQTVMTSATWPTGVRRLA
KSYLKNPMMVYVGTLDLAAVNTVQQTLEIVKEEEKKMFVFDFIRNMQPQDKVLIFVGKKI
TADDLSSDMSLQGIAVQCLHGDREQSSREEALQDFKDSRVRILVATDLASRGLDVHDITH
VFNYDFPRNIEEYVHRVGRTGRAGRSGAAITLLTRDNWRMASELISILERAGQDVPEDLV
LMAERYEKHKIEKKMYSPRGHGWGGRGGGGWRDGKDRSQNWRF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggaggacgagtacgacgagtgcggtgtcgccattgagaaacctgcccct
aacctctctgcgactaacagcacattattgggaaaagatagccaaggacatggaagtgtt
tattccggtataaaaactcaaacctggtttagagaaccgagcgaggcgagagttgagtcc
cgccgagatgcgttcgagttcaggagccgaagaggtgaaacagaccgcggcgaggggcct
gaagaccggcggagagggagcgaagtgtccgacggatcccaacctcttactttcaaagtg
gaaaatatgtccattggaaggataattggtcgcggcggggctaaaatacgtgaacttgaa
gagagcagcggtgctcggatcaagattacgaggggagactatgatggagacgtggccatc
tctggttcgtccgctgctcaggaaaaggccagagaactgattgaagacctgattttaggc
atctcttctcagtttagttacgctccagctagaggtctgtacagtgatgtggaaatgttc
gaaggaagatcggttacagggattaacaggaacaactccgcctggtcgaaggaggcgccg
caggctgcaagtgacggcccggcctcttcagtcatcgactggaacgacatccgacaaaac
aggaaaaaattcgaggagctgaagtggaaagaactcccaccactgaagaagaacttttac
acagaagcagtgagtgtgtcaatgctcacacctgacgaagtcgctgcgtggaggaaggaa
aataacaatatatttgtagatgacataaaggaggagggagagaagcgacccattcctaat
ccctgtcgcacgtttctggaggcgttccaaccttatccagagattatggaaaatattgag
cgtgttggttttgtcaagccaacccccatccagtctcaggcctggccggtgctgctcatc
ggggaggacctgatagcgattgctcagacaggaacagggaaaactctggcctacctgctg
ccaggcttcattcatatggacggacaacctgtactcagagctgaaagggggggcccgggc
atgttggtgctgacccctaccagagaacttgctctacagattgaagcagagtgcagcaag
tacagcttcaaaggatacaaaagcatctgtgtctacggagggggagacagaagaggacag
atcaacctggtgaagagcggcgtggacatcgtgatcgctacacctggccgactcaatgac
ttgcagatgaacaatctcatcaatctacactccatcacctacttggtgctggacgaggcc
gaccgcatgctcgatatgggcttcgaaccgcagattctgaagattctgctggacatccgc
ccagaccggcagactgtcatgaccagtgccacctggcccacaggtgtaagaagattggct
aaatcctatttaaagaatcccatgatggtttatgtgggaactctggacttggctgcagtt
aacacagtgcagcagaccctagaaattgttaaggaggaggagaaaaagatgtttgttttt
gacttcatcaggaacatgcaaccccaggataaagtcttaatctttgtgggaaagaagatt
actgcagatgacctgtcgagtgacatgtctctgcaaggtattgctgtgcagtgtctccat
ggagaccgcgaacaaagctcccgggaagaggctctccaggactttaaggacagtcgggtt
cgcatactggtcgccacagatctggcatccagagggttggatgtccatgacatcacgcat
gtttttaactatgacttcccaagaaacatcgaagagtacgtccatcgtgtgggtcgaaca
ggccgagcaggacgatccggtgcagccattactctgttaactagagataactggaggatg
gcctcagagctgatttctatcctggagagagcaggacaagacgtcccagaagacttggtg
ctgatggcagagagatacgagaagcacaagatagagaaaaagatgtattctccaagagga
catggatggggtggaagaggaggcggtggatggagagatggcaaagacagaagccaaaac
tggcggttctaa
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