Xiphophorus maculatus (southern platyfish): 102238052
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Entry
102238052 CDS
T02923
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03266
Virion - Herpesvirus
xma04514
Cell adhesion molecule (CAM) interaction
xma04517
IgSF CAM signaling
xma04520
Adherens junction
xma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
102238052
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102238052
04517 IgSF CAM signaling
102238052
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102238052
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102238052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102238052
04090 CD molecules [BR:
xma04090
]
102238052
Cell adhesion molecules [BR:
xma04515
]
Immunoglobulin superfamily
Nectin family
102238052
CD molecules [BR:
xma04090
]
Proteins
102238052
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_2
Ig_3
I-set
ig
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
102238052
NCBI-ProteinID:
XP_014326811
UniProt:
M4A8Z5
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All DBs
Position
11:17865710..17882041
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AA seq
501 aa
AA seq
DB search
MEQAGLWIFFVTTCVISEVNGQRVEMDDGKSGYVGSKVDLRCRFINSNPPVKISQVTWQK
LANGSKQNVAIANPSLGVSVAPPYRDRVTFKNAAVRRRTPTLEDTTIIFSSLRLSDEATY
ICEYTTFPAGNRENTVNLTVFVRPTTQMSLSTPTLVARSSNLKTPVATCISANGKPPGTI
RWETRVPGEVTTREYINSDGTFTVQSDYILVPSRETHRETLTCVTTYNEEVYTDSVTLDI
QYEPNVMIDGFDGNWYLNRENVQLSCQADANPVVSLYQWRLVNSSIPSNVEIRDNVLLFK
GPVTYEVQGTYVCDATNSIGTSSAFVEVSVLEKPLPQIATGDVISVIALLLAAGVLMGIT
ITVLVLKIRTRKDSSSGDSPSRKLSQPIRKRPDDFQHAGRFYEELPNTADYVSYRLACNK
EDYPEPYSPPINPPLSFLPQQPYHPSQTMPVLGTSSASTPSKNTFAPQTHTTAIFKYPSV
PGLSSPPPGVGPYTFPKEQYV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggctggactgtggatattctttgtgactacttgtgttatttcagaagtaaac
ggacagagagtggaaatggatgatggaaagtccggctatgttggctcaaaggtggacctt
cgctgccggttcatcaacagtaacccacctgttaaaatctcccaggtaacgtggcagaaa
ctggcgaacggctccaagcagaatgtggcgatagcaaacccatcgctgggtgtgtctgtg
gcccctccttacagggatcgcgttaccttcaagaacgcagcagtcagacggcgaactccg
acgttggaggacacgaccatcatcttttcttcgctccgcctttccgatgaggccacttac
atctgtgaatacacaacgttccctgcaggaaaccgggagaacaccgtaaacctcaccgtc
ttcgttcgcccaacaacccagatgagtttgtccacgcctacacttgtggctcgttcatca
aacctaaaaactccagtggccacctgcatctccgccaacggaaagccacctggaacaatt
aggtgggagacgagggtgcctggagaagtgaccacccgagagtacatcaactcagacggg
acgttcactgttcagagcgactacattttagtccccagcagggaaacccaccgggagaca
ctgacctgcgtcaccacctacaatgaggaggtctacacggacagtgtcactcttgatatc
cagtatgagcccaatgtgatgattgatggttttgatgggaactggtatctgaacagagag
aacgtccagttgagctgccaagccgacgccaatccagtcgtctctctgtaccagtggaga
ctggttaacagctccatcccgagcaatgtcgaaatccgagacaacgtcctcctgtttaaa
gggcccgtcacatacgaggtccaaggaacatacgtgtgtgacgcgaccaacagtatcggg
accagctctgcctttgtcgaagtcagcgttttagaaaagcccctgccccagattgcaaca
ggagacgtcatcagtgtgatcgccttattactggctgctggcgtcctgatgggcattact
atcacagtcctggtgctcaaaataagaactagaaaagacagctcctcaggtgactcacca
tccagaaaactgtctcaacccatcagaaaaagaccagatgattttcagcatgctggacgc
ttttatgaggaacttccaaacacagctgactacgtgagctacagacttgcctgtaacaag
gaggattatccagaaccctactccccaccgatcaacccccctctttcatttctaccccag
caaccctaccacccttcacaaacgatgcctgtcttgggcaccagcagtgccagcaccccg
tcaaaaaacacttttgctccacagacacacaccacagccatctttaaatacccgtctgtg
ccaggtttgtcatctcctccgcctggagtggggccatatactttccccaaagagcagtac
gtctga
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