Xiphophorus maculatus (southern platyfish): 102238102
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Entry
102238102 CDS
T02923
Symbol
prdm11
Name
(RefSeq) PR domain-containing protein 11 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102238102 (prdm11)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102238102 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
Dimer_Tnp_hAT
FOG1-like_PR
DUF7822
WD40_alt
DUF6448
Motif
Other DBs
NCBI-GeneID:
102238102
NCBI-ProteinID:
XP_023207888
Ensembl:
ENSXMAG00000006891
LinkDB
All DBs
Position
2:5102700..5128061
Genome browser
AA seq
1035 aa
AA seq
DB search
MTQQPSDPWFCEDCRTYFQEECPSHGPPLFVPDTPVAPGPANRAALTVPSGLEVVTEGSQ
VDVRCVDAIFPKGALFGPYQGELVSKEEPASSFSWIIVGLNNSSQSIDGGDETKANWMRF
VRTSSEDSDRNLTAFQHSGNIYFRVCRRLEAGEKLRVWYSSDYIQKLQCVSQDSINRNLD
TGPETSTVPRSLHKELPAPKLCTGKQSCEETDGQPPAKKKKIDLIFKDVIEASLEDCTKP
RSGSSPSVPNLKVEKGEDNLTSGEPSTSFCPNCVKLKRRILELEEELSHLRKQQGNSVGP
SSSELQPDPPHPEQGPIEDSQGMEPLTPTQMVLDEDDQEVDSADESVSADLVISPEDSSK
PYSGSSRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIH
TIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCKNMTILFNAAYHLALEGRAFSDLRPLAEL
LKKCELKIVDQYMNEGDCQILVHHIARALKEELAEKMRLSPFLSVIMDAQNDDLYSDLVA
VYVQFTTSDSSPQMEFLSLERVSMPNVDGYLQLLDRAFSVLGLRFQDLLVVGLGVDGTNI
SSGIRGSLYISVKKTFPWILCLPILIHRPHLEVLDAISGKELSCLEDLENNLKQLLSFYR
YSPRMMAELRSTAPTLSEETEFLGDIRAVRWIIGEPNVLNALIKDYLEVLAHLKEISSQT
QRDDAAAIALTLLQFLMDYQSVKLIYFLLDIIAVLSRLALTFQGEHLLVSQVEARLEEAI
QEIGQLVDCPGEYLQEFEENFRESFNGVALKNLRVAESKFQSIRKKICSRSQGILSQRLD
LQSRSFTKACKVLDLDSWPGNREDLKTFGEEEIQIIFNHLDSIPSAGQDGRTENRSNLLV
EWKELKVDYFSMNSFKDILIHICRYKQRFPLLNQILQVVRVLPSSTACCDKGRGALQRIC
KNNRSRLTLEQMNDLLTMAVNGPPVANFDAKRALDSWFEEKSGSSYSLSAEVLNRMSDVD
PKSGLHSGDINAEYL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacagccatcggacccctggttctgcgaggactgtcggacgtatttccaggag
gagtgtccgtcccacgggccgccgctcttcgtccccgatacgccagtggcccctggaccg
gccaacagggcggctctcacggtcccatcaggcctggaggtcgtcactgagggaagccag
gtagatgttcgatgcgtggatgcaatcttcccaaagggggcgctgtttggtccgtaccag
ggtgagctggtgtccaaggaggaaccagccagctccttctcctggattattgtcggtttg
aacaattcgtctcagtccatcgatggcggcgatgagaccaaagccaactggatgaggttt
gttcgtacctcgtcagaggacagcgacaggaacctgacggccttccagcacagcggaaac
atctacttcagagtctgcaggaggctggaggccggagagaagctcagggtttggtacagc
agcgactacatccagaaacttcagtgcgtctctcaagacagcatcaatcgcaacctggac
acaggtcctgagacgtcaacagtcccccgaagtctccataaggagcttccagctcctaaa
ctgtgcaccggcaagcagtcctgtgaagaaacagacggtcagcctcctgccaagaagaag
aagattgatctgattttcaaagacgttatagaagcttctctggaggactgcactaagccc
aggtctgggtccagtcccagtgttcccaacttaaaggtggagaagggtgaggataacctg
accagcggagaaccctccacctccttctgccccaactgcgtcaaactgaagaggaggatt
ctggagctggaggaggagctgtctcatctcagaaagcaacaggggaactcggttggtcca
tcaagttctgaactccaaccggatccaccgcatcccgaacagggtcccatcgaggactct
caaggtatggaacctttgacgcccactcagatggtactggatgaagatgaccaggaagtg
gactcggctgatgagtcggtttcagccgacctggtgatttccccagaggactcatcaaag
ccttactctggatcaagcagacgaattcgccgcttcaagcaggagtggctgaagaagttc
tggtttcttcggtactcaccgacccttaatgaaatgtggtgccatgtctgccgccagtac
accgtccagtcgtctcgaacgtcagccttcatcatcggctccaagcagttcaagatccac
accatcaagctgcacagccagagcaacctccacaagaagtgtctgcagctctacaagctg
cggatgcatcctgagaagacggaggagatgtgcaagaacatgacgattctgttcaacgcg
gcgtaccacctggctctcgagggacgggccttttccgacctacgtcctctggctgaacta
ctgaagaagtgcgaactcaaaattgtagatcagtacatgaatgagggtgactgtcagatt
ttggtccaccacatcgctcgagctctgaaggaagaattggctgagaagatgcgtctgtct
cctttcctgagcgtcattatggatgctcaaaatgacgacctttactcagatttggtggca
gtttatgtccagttcacaaccagtgacagttccccacaaatggagttcctgtccttagag
agagtgagcatgcctaacgtggatggatacctccagcttctggatcgggccttcagtgtc
ttgggactcagatttcaggacttgctggttgtaggtcttggagtggatggcaccaacatc
tcctcagggattagaggaagcctttacatatctgtaaaaaagacttttccttggatcctc
tgtcttcccatattgatccaccggcctcatttggaggtactggacgccatcagtgggaag
gagctctcctgtcttgaggatctggaaaacaacctgaagcagctcctcagtttctaccgc
tactctccacgcatgatggccgagctgcgatccaccgctccaactctgtccgaggagacg
gagttcctgggtgacatcagagccgttcgatggatcataggagaaccaaacgtcctgaat
gcactcatcaaggattacctggaggttttggcacacctgaaggagatcagcagccaaaca
cagcgggatgacgctgcagctatagccctcacactcctccagttcctcatggactatcag
tctgtgaaactcatctacttcttgctggacatcatagctgttctctcgcgactggccctc
accttccagggggagcacctgctggtgtcgcaggtggaagccaggctagaggaggcgatt
caggaaatcggccagttggtggattgtcctggtgaatatctgcaggagtttgaggaaaac
ttcagggaaagcttcaatggtgtcgctttgaagaaccttcgtgttgcagagtccaagttt
cagtccatccggaaaaagatctgcagccgaagtcaggggatcctgtcacagaggctggac
ctgcagagccgctccttcaccaaagcctgcaaggtgctggacctagacagctggcccggc
aaccgtgaagacctgaagacgttcggtgaggaggaaatccagatcatattcaaccacctg
gactccattccttctgcaggtcaggacggccggacggagaacaggagcaacctgctggtg
gaatggaaggagctgaaggtggactacttcagcatgaacagcttcaaagacattctgatt
cacatctgcaggtacaagcagcgtttcccgctgctgaaccagattttgcaggtcgtcagg
gtcctgcccagctcaacggcctgctgcgataaaggtagaggcgctctgcagaggatttgt
aagaacaaccgttcccggctgaccctggagcagatgaacgacctgctcaccatggccgtc
aacgggccgcccgtcgcaaactttgacgcaaagcgagcgttggacagctggtttgaggag
aagtctgggagcagctactctctttcggccgaggtgttgaacaggatgtcggatgttgat
ccaaagtcaggcctgcacagcggtgacatcaacgcagaatatctgtag
DBGET
integrated database retrieval system
