Xiphophorus maculatus (southern platyfish): 102238139
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Entry
102238139 CDS
T02923
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102238139 (zeb1)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
102238139 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
Homeodomain
zf-H2C2_5
zf-C2H2_16
HVO_2753_ZBP
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
102238139
NCBI-ProteinID:
XP_023182175
Ensembl:
ENSXMAG00000005475
LinkDB
All DBs
Position
21:21003735..21067325
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AA seq
1084 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVTNYNNVLEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
EEHPSVPSWDPVKEDCASDGEDDVSTDALVEEMLQQGDTAIIYPEAPDDDLQRQGTPDAS
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQL
ERHMSVHKGGRDQRHITQSGGNRKFKCPECGKAFKYKHHLKEHLRIHSGEKPYECSHCKK
RFSHSGSYSSHISSKKCISVISVNSRQRLGGSRNQAQGSPPGLPTSPSVHCGQIREKLEH
SKPLQEQLPLNQIKTEPMDYEYKPAVITPPAMAAMNGGVFSGGAAAPLQGTVQAVVLPTV
GLVSPISINLADLQNALKVAVDGNVIRQVLENNAKGQVNSGLTTQTLHPPQQQLISAISL
PIVGQDGNAKLIINYSLDPNQGQLTPHNLKKEPVSPAQSAVDSIKSQKLPEDLSVRGNRD
QAQQKEEKTTTTCLLCENCPGGLEALHALKHCKKEDLRLNGAGLDKSEAVAALLSDGGLC
NHPKNLLSLLKAYFALNAEPSKDELVKISDSVSLPIHVVKKWFSKMQEGQISLGAPTPPS
EEEDSYESHSVVSLVPGKDTATISRSVSQESPTEATPAEVNGTHSSPASPSPLNLTAGGP
TQADTPESTEGPLDLSLPKPAREEAESMVPAARVYPSASSRQTTEEEPLNLTCTKKDTSP
LSAMGGSPLALYANQPSAKPLDIVTTMQCLRALTNNSNKQTILIPQLAYTYTTTANSPAG
TETHETIHLNGIKEERLDLGSEGFSVVDELNDSDSGPARKKMKKTDSGMYACDLCDKIFQ
KSSSLLRHKYEHTGKRPHECSICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGS
YSQHMNHRYSYCKKETQSQAGGRESPAEEDGEVPTERQRQDTAPSLLDSDERGSSTREDE
ESEEEEEGVVDMNDIQVVQIEDEEEEDKEERKEEQMETEREDGTLEMEEKEEVDVRQEEM
RRSVQEEEEESDAGKDEVTDKEGGAAEEEDGEDGEVQEESRGETNQSGVSQDEEETPEEK
ADTD
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaccaacgtg
accaactacaacaatgtgctggaggcaggctcagactcagacgatgaggacaagctgcac
atcgtggaggaggaaggcagcctcgcagacggggcagactgcgacagcaccctgccggat
gaagagcacccgagcgtgccgagttgggacccagtgaaggaggactgcgcttcagatggc
gaggatgacgtgagcacggacgccctggtggaagagatgctccagcaaggagacacggcc
atcatctacccagaggccccagacgatgacctccagcgccagggcacccccgacgccagc
gtccatgacgagaacggaacccctgattcgttctcccagctgctcacatgcccgtactgc
gcgcggggctacaagcgctacagctccctgaaggagcacatcaagtaccggcatgagaag
acagaggagagcttcagctgcccagagtgcagctacagcttcgcataccgcgctcagttg
gagcgtcatatgagcgttcataagggaggacgagatcagaggcacatcacgcagtccgga
ggcaaccggaaattcaagtgccctgaatgcggcaaagcattcaagtacaagcaccatctg
aaggagcatctccggattcacagtggagagaaaccctatgagtgctcccactgcaagaag
cgcttctcccactcaggctcctacagttcccacatcagcagtaagaagtgcatcagcgtc
atctcagtgaacagcagacagcgcctggggggcagcagaaaccaggcccagggttcacca
ccggggctgcccacatccccttcagtccactgcggacagatcagggagaaactggagcac
agcaagcccctccaggagcagctgcctctcaaccagatcaagacggagcccatggattac
gagtacaagccggcagtaataacgcctccggccatggccgctatgaatggtggagttttc
agcggaggtgctgctgcccctctgcagggtactgtacaggcggtggttctgcccacagtg
gggttagtgtcccccatcagcatcaacctggcagacctacagaatgccctcaaggtggca
gtggacggtaacgttatacggcaggtgctggaaaacaacgccaaaggccaggtgaactca
ggcctcaccactcaaaccctgcacccccctcagcagcagctcatctcagccatcagtctg
ccaatcgtaggccaggatgggaatgcgaaacttattataaattacagtctggaccccaac
cagggccaactcacaccccataacctaaagaaagagccagtgtctccggctcagagtgcc
gttgactctatcaagtcccagaaactccccgaggatctttcagtcagaggcaacagggac
caggctcagcaaaaagaggaaaagaccactacaacctgtctactgtgtgagaactgtcca
gggggcctggaagcactccatgctctcaagcactgcaagaaagaggatctcagattgaac
ggagcaggtttagataaatctgaggcagttgctgccttgctgtcagatggaggactctgc
aaccaccccaagaacctcctgtcccttctcaaggcctatttcgccttaaatgcagagccc
tccaaggatgagctggtcaagatctctgactcagtcagtctgccgatccatgtggtaaag
aagtggtttagcaaaatgcaggagggtcagatatccctgggcgccccaacacccccatca
gaagaggaggactcctatgaatctcacagtgtggtatcactggtcccagggaaggacaca
gccactataagcagatctgtgagtcaggaaagccccacagaggctacgccagcagaggtc
aacggcactcacagctcaccggcctcgccctcgccacttaaccttacagctggcggtccc
acccaagccgacacccctgagagcactgagggacccctggacctgtcgctgccaaagcca
gccagagaagaagcagagagcatggtgcctgcagcccgagtttacccctctgcttcctcc
cgccagaccactgaagaggaacctctgaacttaacttgcacaaagaaggacacgtcacca
ctctcagccatggggggaagccccctcgcactgtacgccaaccagccaagtgccaaaccc
ctcgatattgtaaccacaatgcaatgcctccgagcactgaccaacaacagcaacaaacag
actattctgatcccccagctggcttacacatacaccactacagctaacagccctgcaggg
acagagacgcacgaaaccatccacctcaatggaatcaaggaggagaggctggatctgggc
tcagagggattctcggtcgtggacgagctgaacgactccgactcgggcccagcgaggaag
aagatgaagaagacggacagcggcatgtacgcctgcgacctgtgtgacaagatcttccaa
aagagcagttcgctactgagacacaaatacgaacacacagggaagcgacctcacgagtgc
agcatctgcagcaaggccttcaaacacaaacaccacctgatcgaacacatgcgcctccac
tcgggggagaagccgtaccagtgcgacaagtgcggcaagcgcttctcccactcgggctcc
tactcccagcacatgaaccaccgctactcctactgcaagaaggagacgcagagccaggcc
ggaggacgggagagccccgcggaggaggacggcgaggtccccacagagcggcagaggcag
gacacggcgccctccctactggactcagacgagcgagggagcagcaccagggaggacgaa
gagagcgaggaggaggaggagggagtggtggacatgaatgacatccaggtggttcagata
gaggacgaggaggaagaggacaaagaggagagaaaggaggagcagatggagaccgagaga
gaggacggaacattagagatggaggagaaagaggaagtcgacgtgaggcaggaggagatg
cggcggagcgttcaggaggaggaggaggaaagcgacgccggcaaagatgaggtgacagat
aaggagggaggtgcagccgaggaggaggacggggaggacggggaggtccaggaggagagc
agaggcgaaacgaaccagagcggggtttctcaggacgaggaggagacgccggaggagaaa
gcagacacagactga
DBGET
integrated database retrieval system
