Xiphophorus maculatus (southern platyfish): 102238169
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Entry
102238169 CDS
T02923
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X2
KO
K15178
RNA polymerase-associated protein RTF1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xma03021
]
102238169 (rtf1)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102238169 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
102238169
NCBI-ProteinID:
XP_005814713
Ensembl:
ENSXMAG00000006716
LinkDB
All DBs
Position
19:complement(23874330..23887310)
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AA seq
678 aa
AA seq
DB search
MVNVKKRKVRNVIDSDSEDSASDDNLDQELLSLAKRKRVDSGEHEEPVNKPAASTDSETS
DSDDEWTVGGTKGKKKVKPGKGSEKKSATKKKVNKATASGSSDGDSSADSSAPEEGEVSD
TESNSSSSSSDSDSSEDEVFKDGYDDDLMGDAEDRARLEQMTEKEREQELFNRIEKREVL
RRRFEIKKKLKTAKKKEKEEKKKKQEEEQEKRKQSQVQDTLVVSMSHNKERRSKRDEKLD
KKSQAMEELKAEREKKKNKTAELLAKREPLKTSEVYSDDEEEEEEDDDKSSVKSDRSSRS
SSFDEDEKEETPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSS
SKPVYRVAEIVDVVETTKVYQLGSTRTNKGLQLRHGADTRVFRLEFVSNQEFTESEFMKW
KEAMIVAGMQVPTLDEITKKEQSIKEAMNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQ
LLKDKAMAEENGDGEKVKTIQDELNELEERAEALDRQRTKNISAISYINQRNRSWNIVES
EKALVAEGQNSKNQQMDPFTRRQCKPTMVSNARDPSVHAAILAHLNQKYGSGSGGVDPAS
TEKNKGPANPKDKDVPKPTTDLSEDLFKVHDFDVKIDLQVPNAEAKSLSVSSNALPVKDG
APRRSLNLEDYKKRRGLI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgttaagaagcggaaagttcgaaacgtgattgactctgactctgaagacagt
gctagtgatgacaatttagatcaggagctgttgtccttggcgaagaggaagagggtggac
tcaggcgagcatgaagagcctgtaaacaaaccagcagcgtccacagactccgagacgtcc
gacagcgacgatgagtggaccgtgggcggcaccaagggcaaaaagaaggttaagccgggg
aaaggctctgaaaagaagagcgccactaaaaagaaggtcaacaaggccacggcgtccggc
agctccgatggagacagctcggcggacagctccgctcccgaggagggcgaggtttcagat
acagaaagcaacagctcgtcctccagctccgactcggactcctccgaagacgaggtgttc
aaggacggctacgacgacgacttgatgggcgacgccgaggaccgggcgcgcctggagcag
atgaccgagaaggagagggagcaggagctgttcaacaggatcgagaagagagaggtgctg
cggagacggttcgaaattaagaagaagctgaagacggcaaagaagaaggagaaagaggag
aagaaaaagaagcaggaggaagagcaagaaaaacggaaacaatctcaggttcaagacact
ctggtggtgtccatgtcacataacaaggaaaggcgatccaaacgcgatgaaaaactggac
aagaagtcccaagccatggaggaactgaaagctgaacgtgagaagaagaaaaacaaaacg
gctgaactgctggctaaacgagagcccctcaagacgagcgaggtctactccgacgacgag
gaggaggaggaggaggacgacgacaaatcgtcggtcaaaagcgaccggagctcacgctcg
tcgtctttcgacgaagacgagaaagaggagacgccgccgaagtcgcagcccgtctccctc
cccgaggagctcaaccgggtccgactgtccagacacaagctggagcgctggtgccacatg
cccttctttgcgaagacggtgaccggctgcttcgtgaggatagggatcgggaacagcagc
agcaaaccggtctacagggttgctgaaatcgtggacgtagtagaaacgacaaaagtttat
caacttggatcaacgcggacaaacaagggattacagttgaggcatggggccgacacgcgg
gtattcagacttgagtttgtatcaaatcaagagttcacagaaagtgaattcatgaaatgg
aaggaggcgatgatagtcgctgggatgcaggtgccaactcttgatgaaatcaccaagaag
gaacagtcaatcaaagaagctatgaattacaagttcaacgataaagacattgaggatatc
gtcaaggagaaggacaggttccggaaagcaccgcctaattatgccatgaagaaaacacag
ctacttaaagacaaggctatggcagaagaaaatggcgacggcgagaaagtaaaaactatc
caggatgagctgaatgagctcgaggagagagctgaagcacttgacagacagaggaccaag
aacatttcagctatcagctacattaaccagaggaacagaagctggaacatcgttgagtct
gagaaagcacttgtggctgaagggcagaattccaaaaaccaacaaatggaccccttcact
cgaaggcagtgcaaacccaccatggtgtcaaatgccagggatccgtcggtccatgcagct
attcttgctcacctgaaccaaaagtatggctcagggtcgggaggtgtagatcctgctagc
acagagaagaacaagggcccagcaaaccctaaagacaaagatgtccccaaaccaaccact
gacctctcagaagacttgtttaaagttcacgattttgatgttaagattgacctgcaggtc
cctaatgcagaagcgaaatctctctctgtgagctccaacgcgctgccggtgaaggacggt
gctcctcgccgctccctcaacctggaggactacaagaagaggaggggcctgatctga
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