Xiphophorus maculatus (southern platyfish): 102238192
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Entry
102238192 CDS
T02923
Symbol
mars
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma00450
Selenocompound metabolism
xma00970
Aminoacyl-tRNA biosynthesis
xma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
102238192 (mars)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102238192 (mars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xma01007
]
102238192 (mars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102238192 (mars)
Enzymes [BR:
xma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
102238192 (mars)
Amino acid related enzymes [BR:
xma01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102238192 (mars)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102238192 (mars)
Prokaryotic type
Other AARSs
102238192 (mars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_N_2
GST_N_3
GST_C_2
GST_C_3
GST_C
tRNA-synt_1e
HTH_23
Motif
Other DBs
NCBI-GeneID:
102238192
NCBI-ProteinID:
XP_023180935
Ensembl:
ENSXMAG00000017920
UniProt:
A0A3B5QY01
LinkDB
All DBs
Position
20:12884996..12901019
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AA seq
921 aa
AA seq
DB search
MELFVSEGNPHCLKVLAALEVTGVQCGVQFVNHEGKVVPFLPRPAVPTLFLPSGQHLFSS
NTICRYLFELNGPESSDQCNQWLEWEATILQPALLRALHLAVLQGKGSEVPKVLQGPLNV
LDQSLVKGSMAYLTGEAVSVADVVLWGALHPVLSVSSLELSDHKSAKAWFDRVAAVRGCQ
SAAQKVLQGKGLEAMKSYMQKQPAPQSRDTQPCNSSPAENDEGERTVSEEEMEAAALTWS
KDLNACSYPAEKQHPVMPQEGNRNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYGQLR
GWNVLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYKWFQIDFDFFGRTTTEK
QTEIAQDIFWRLHKNGFLVEDTVEQLRCENCQRFLADRFVEGMCPHCSYPEARGDQCDKC
GRLINAVELREPQCKVCRQTPEIRSSKHLFLDLPKLETQLENWLERSTSSGDWTANAKQI
TRSWLRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTNEWEKWWK
NPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVSHLIATEYLNYEDTKFSKSRGVG
VFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRGGMFV
TKFFGGCVPAMELQQEDKKLLAVVGWELQQYIQLMDKVKIRDALKHILNISRHGNQYIQV
NEPWKKIKGGESERQRAGTVTGVSVNIACLLSVMLLPYMPAVSQTIRDQLNAPQTCINTM
LQGPGTFVCALRAGHRIGTVSPLFQKLEADQIEALKKRFGGQQPEDEPSNKKITASTQPA
AVPAPPVVAEMKVVDGSDPEKAKQLAEAVAEQGDKVRALKSQKAEKAIITAEVSKLLDLK
KQLALAEGKSPEPAPQKGKKK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtttgttagtgaaggcaacccgcattgtctgaaggtgttagctgcactggaa
gtaacaggagttcagtgcggcgttcagttcgtcaaccacgaagggaaggtggtgcctttc
ctcccccgtccagctgtgcctactctttttctacccagtgggcagcaccttttcagctct
aacactatttgcaggtacctgtttgagttaaatggaccagaatctagtgatcagtgcaat
cagtggcttgagtgggaagccacaattctccagcctgcactgctacgggctcttcacttg
gcagtgcttcagggaaaagggtcagaggttcccaaagttctccagggtcccctaaatgtc
ttggaccaaagcttggtcaagggcagcatggcatatttaactggggaagctgtttcagtt
gctgatgttgttttatggggtgccctgcatcctgttttatccgtctcttctctagaattg
agtgatcataaatcagcaaaggcttggtttgaccgtgttgctgcggtgcgtggctgtcag
tctgcagctcagaaagtgctgcagggaaaaggcctggaggccatgaagagctacatgcag
aagcagcctgcacctcagagcagagacacacagccatgcaacagcagccctgctgagaat
gatgaaggtgagcgtaccgtttcagaagaggagatggaagcagcagctctcacctggagc
aaggatttaaacgcctgctcctatccagctgaaaagcaacatccagttatgccacaagag
ggcaaccggaatgtcctcatcaccagcgccttgccatatgtcaacaatgtcccccacctg
ggtaacatcattggctgtgtccttagtgcggatgttttttccagatacggccagctgcga
gggtggaatgtgttgtttgtctgtggcacagatgagtacggcacggctactgagaacaag
gccagagaggaaggcctgacaccgcagcagatctgtgacaagtaccatgctgttcactcc
agtatctacaaatggttccagattgactttgacttctttgggagaaccaccactgagaag
cagacagagatcgctcaggatatattctggcgactccacaagaatggatttcttgttgaa
gacacggtggaacagcttcgctgtgaaaactgtcagcgcttcctggctgaccgctttgta
gagggaatgtgtccccactgcagctatccagaggctcgcggtgatcagtgtgacaagtgt
gggcgcctcatcaacgccgtggagctcagggaacctcagtgcaaagtctgcaggcagact
ccagaaatccgctcctccaaacatctcttcttggacctgccaaagctagaaactcagttg
gagaattggctagagagatcaaccagctctggagactggacagcaaacgccaaacagatc
actcgctcttggctcagagatggactcaagcctcgctgcatcaccagggacctgcagtgg
ggaacaccagtacctcacccagactttaaagagaaggtgttctacgtttggttcgatgct
cctattggttatctgtctattactgccaactacaccaacgaatgggaaaagtggtggaaa
aatcctcatcaggtggagctgtacaacttcatggcgaaggacaatgtgccgttccacagt
gtggtgtttccctgctccctactgggagcccaggacaactacactctggtcagccatcta
attgctactgaatatctgaactacgaggacacaaagttctcaaagagccgtggtgtcggt
gtgttcggtgacatggcgaaggacactggcatcccttcggacgtatggcggttctacctc
ctgtatgtgcgtccagaaggacaagattcagctttttcttgggctgacatggccctaaag
aacaactctgagctgctcaacaatttggggaacttcatcaacagaggagggatgtttgtg
accaagttttttggaggatgcgtgcctgcgatggagctacagcaggaagacaagaagctc
ctggctgtggtgggctgggagctgcagcagtacatccagcttatggacaaagtcaagatc
cgcgatgccttgaagcacatcttgaacatttctcgtcatggtaaccaatacattcaagtc
aatgagccctggaagaaaataaagggaggagagtcagaaaggcagcgcgccggcaccgtg
acgggcgtttctgtgaatatcgcctgcttgctgtcggtgatgctcctgccttacatgcca
gcggtcagccagaccatcagggatcagctcaacgctcctcagacttgcatcaataccatg
ttgcaaggccccggcaccttcgtgtgcgccctgagagcgggccaccgcatcggcaccgtc
agtccgttattccagaaactggaggcggatcagatcgaggctttgaagaagaggtttggt
ggacagcagcctgaagacgaaccatctaataagaagattactgctagcactcagcccgct
gcagttcctgctcctcccgttgttgccgagatgaaggtggtcgacggatcggatcccgag
aaagccaagcagctggcggaagctgtagccgaacagggcgacaaggttcgagcgcttaaa
tcccaaaaagcagaaaaggctataatcacagcagaggtttccaaacttttagaccttaag
aaacaactggctcttgctgaagggaagagccctgagcctgcacctcagaagggtaagaaa
aagtga
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