Xiphophorus maculatus (southern platyfish): 102238355
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Entry
102238355 CDS
T02923
Name
(RefSeq) sorting nexin-1-like
KO
K17917
sorting nexin-1/2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102238355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102238355
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
102238355
Membrane trafficking [BR:
xma04131
]
Endocytosis
Macropinocytosis
Sorting nexins
102238355
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102238355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
adh_short_C2
Motif
Other DBs
NCBI-GeneID:
102238355
NCBI-ProteinID:
XP_005814221
UniProt:
M3ZIC1
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All DBs
Position
2:22728688..22741711
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AA seq
742 aa
AA seq
DB search
MATSSERSPPPFPDSEDQDALDSEEVRGRDSDEDDGDELFLSAANTPMAKKESPSAPAGQ
LVDLLSDPLIEPLSSTTNEPSSELFEDLTNDTAVTAGKASDVASDEFVDILGSEAAAQRE
EVDVTVEAAAAADKGETSRGATDLLADGETRSATEQKATSAAPVMDLGGSQQPPASAKVT
DPLEDLLSYPPATATSNTHQPGGAVVDLFDDEGSDIFTGAPSSKPAKQPQKSLFGEADED
LFGEPLGAVSKKAAAKEQKEKSVLASAGEPAHIFTEEAVGIVPNARAVDSKTNGIPPEED
SDIFSEATVELSLDSPRSERRKEATTKPPASASTSVSTSLAKPQSVAVEELEEEEEEELE
DKFDIYVSVKDPEKIGDGMNAYMAYKVSTQTSLPMFRNKTFTVRRRFSDFLGLYEKLSEK
HGPNGLIVPPPPEKNLLGMTKMKVGKEDSSSADFLERRRGALERYLQRVVTHPMLLQDPD
VREFLEKEELPRAVSTQALSGAGFLKMLNKATDAVSKMTIKMNESDVWFEEKLQEVESAD
QQFRKLHALVELLVVHRKELSLNTASFAKSAAMLGSAEDNTALSRALSQLAEVEDKMEQL
HQDQAANDTFSFAEMIADFIRLLGAVRGTFDQRMKAWQRWQDAQAMLQKKRETEAKLLWA
NKPDKLQLAKEEIAEWEAKVTQYERDFERVSATVRKEVVRFEKEKTKNFKRQIIVYLESL
LQSQQQLIKYWEAFLPEAKAIA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcagagcgcagtcctcctccgttcccggattccgaggaccaagatgct
ctggactccgaggaagtcagaggccgagacagcgacgaggacgacggggatgagcttttc
ttgagcgcggccaatacgcccatggccaaaaaggagagcccatcagcacctgccggtcag
ctcgttgacctcctgagtgaccctttgattgagcccctcagcagcacgacaaacgaaccc
tcctctgagcttttcgaagacctgacaaacgacacagccgtcacagcgggcaaggcgtcg
gacgtggcctcggatgagtttgttgacattctgggaagtgaagctgcagcacaaagagag
gaagtggatgttacggtggaagcagcagcggcggcagataagggtgaaacgagccgtggc
gcaacagatttactcgccgatggagaaacgagaagtgccactgaacagaaagcgacttct
gccgctccagtcatggaccttggcggctcgcagcagccacctgccagtgcaaaggtcacc
gacccgctggaggacctcctgagctatccgccggccaccgccacgtccaacactcaccaa
cccggtggcgcggtggtcgacctcttcgacgacgagggaagcgacattttcaccggagcc
ccgtctagcaaacccgccaagcagcctcagaagagcctcttcggcgaagcggatgaggac
ctgttcggcgagccgctgggcgccgtctcgaagaaagccgccgctaaggagcagaaggag
aaatccgtcctggcttcagctggagaacctgcacacatcttcaccgaggaggcggtcggc
attgtgccaaacgccagagcggtcgactccaaaaccaacggaatccctcccgaagaggac
tctgatatattttcagaagccacagtggagctttccctggacagtccgaggagcgagaga
aggaaagaggcgacgaccaaaccgcctgcttccgcctccacctccgtctcaaccagcctc
gccaagccacagtcggtcgccgtggaagagctggaagaggaggaggaagaggagcttgaa
gataagtttgacatctatgtctctgttaaagaccctgagaaaataggggacggcatgaac
gcctacatggcttataaagtatcaacacagacctctctgccgatgttccgcaacaaaacg
tttacggtgaggcgacgcttcagcgacttcctgggcctctacgagaagctttccgaaaaa
cacggaccgaacggattgatcgttcctccgccgccagaaaaaaacctcctaggaatgaca
aaaatgaaggtgggaaaggaagattcgtcatcggcagactttctggagaggagaagagga
gctttggaaaggtatctccagagagtagtgactcacccaatgctcctgcaggatcctgat
gtcagagagtttctggagaaagaggaactgcccagagccgtcagcacccaggcgctgagc
ggggccggcttccttaagatgctcaacaaggcaacggacgccgtcagtaaaatgaccatc
aagatgaacgagtcggatgtgtggtttgaggagaagctgcaggaggttgagtctgcagat
cagcagttcaggaagctccacgctctggttgagttgctcgtcgttcacagaaaagagctg
tccctgaacacggcgagcttcgccaagagcgcggccatgctgggtagcgccgaggacaac
acggcgctgtcccgcgccctgtcgcagctggccgaggtggaggacaagatggagcagctc
caccaggaccaggccgccaatgacaccttcagcttcgccgagatgatcgcagacttcatc
cgcctgctgggagcggtcaggggcacgttcgaccagcggatgaaggcgtggcagcgctgg
caggacgcgcaggccatgctgcagaagaagagggagacggaggccaagctgctgtgggcc
aacaagccggacaagctgcagctggccaaggaggagatcgccgagtgggaggccaaagtg
actcagtacgagagagactttgagagagtttctgcaactgtgcgcaaggaagtcgtccgc
ttcgagaaagaaaagaccaagaatttcaagagacagataatcgtgtacctggagtctctg
cttcagtctcagcagcagctgatcaagtactgggaggcgttcctgcctgaagcaaaagcc
atcgcctaa
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