Xiphophorus maculatus (southern platyfish): 106699698
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Entry
106699698 CDS
T02923
Name
(RefSeq) zinc-activated ligand-gated ion channel-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
106699698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
106699698
Ion channels [BR:
xma04040
]
Ligand-gated channels
Serotonin (5-HT3)
106699698
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
106699698
NCBI-ProteinID:
XP_014325170
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Position
16:11167453..11172041
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AA seq
414 aa
AA seq
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MESAIFLLSLLIFGCSQAEIKCTTRRCLAQMLIRNQYLSSPQSENCTLLVEVPLIEYETL
SVDMKELHLMSRLQVTIAWVDPELAWNTSVYPFDKLILPVDKVWTPYISIENGQSSMEHD
SPDLVVYSNGTVGHNVVIIAEVNCGINLFNYPFAFDVCPVGLKSTAPDECGISIKVDQVK
LAESSHGDWQTEEVKLGKKREDRNFIDVSLRIRYTNPFITLLLPTILIMVADIVSGALPL
QGGERNSFKVTLVLSFTMFLNILTTVLPGDSKCSPVIRIHFCVCQVLMVISMLVSMFLTR
VSQDGLAFFTCFSKNPASQNAEDNKENEDAENKGVISVVQQGLSEDSKMLRKIVRFMEAV
DTKQTERESHQKLADKLDRIFFWLYLICSSGYVVAMTYVMVQYTCNIDHFQFWN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgcaatctttctgctgagtttgctgatttttggatgttcacaagctgaaatc
aagtgcacaactcgcagatgtctggctcaaatgttaattagaaatcaatatttatcttca
cctcagtctgagaactgcaccttacttgttgaagttccattaattgagtacgaaacgctg
tcagtcgacatgaaggaactacatctaatgagtcgtctgcaggttacaattgcatgggtg
gatccagagctggcgtggaacacatcagtatatccatttgacaaactcattttgccagta
gataaagtgtggaccccgtatatctctatagaaaatgggcaaagctccatggagcatgat
tcgcctgatctcgtggtgtacagtaatggtacagtggggcacaatgtggtcataattgca
gaagtgaattgtggaatcaatctgttcaactatccttttgcttttgatgtgtgccccgtt
ggacttaaatccacagcaccagatgaatgtgggataagcataaaagttgatcaagtgaag
ttggcagagagttcccatggagactggcaaacggaagaagtgaagctgggaaaaaagcga
gaggatcgcaattttattgatgtgtctctaaggatcagatataccaacccattcatcaca
ttactcctgcccactatcttgatcatggtggctgatatagtcagcggtgctctgccactg
caaggtggtgagcgcaactcgttcaaggttaccttggtgctcagcttcaccatgtttctg
aacattctcaccaccgtgcttcctggagacagcaagtgcagcccagtcatccgaatccat
ttctgtgtttgccaagtcctgatggtgatcagcatgttggtatccatgttcttgacaagg
gtgtctcaagatgggctggcttttttcacctgcttcagtaaaaatcctgcttctcaaaat
gcagaagacaacaaagaaaacgaggatgcagagaacaaaggtgtcatcagcgtcgttcag
caaggtctttctgaggactctaaaatgctccggaagatagtcagattcatggaggctgtt
gacaccaaacagacagaaagggaaagtcatcagaaacttgcagataaactggacagaatc
tttttctggttgtatcttatctgtagctctggatatgttgttgccatgacttatgttatg
gtacagtacacatgtaacattgatcattttcagttttggaactaa
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