Xiphophorus maculatus (southern platyfish): 106699924
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Entry
106699924 CDS
T02923
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
106699924
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106699924
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
106699924
NCBI-ProteinID:
XP_023207539
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All DBs
Position
18:19217032..19227724
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AA seq
1014 aa
AA seq
DB search
MQMFCWGDSSSGQFGVQATLSPVSWTGPGVLTNICCGEQHTLFLREDGKVLSCGHNSQGQ
LGRRNQSGKMLGSVEGLGDVVAMACGQDHSLALCASGHVFSWGAGDDGQLGLAQGHPSNN
QRPSRVPIPMPIPVIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKDVTLQQRPVLVC
ALTGVAVTQVSAGGSHTLFLTLSGLTYCCGANKSGQLGLNRVDEKGRFNVCMVPALRPLG
VSSISCGESHTAVLTKDGKVFTFGDGSHGQLGHNASTTEVRPRLVDGLGETASQVACGRR
HTLVLTSSGRLFAFGNGDKGQLGTGQRDSSSSPSLVQLPWASDSAAATPSDLKLSAGWDT
NFIYTSPAKTFNHGQIIGRLDEKKLQKWVAMKYSNIEAKREIESMFYTSSSLVASFTKPE
GAPLEAGALTVDLEAACQAFDQMLAVPWIKQTVNLELLIELLILSRHPLKSPEILLILLT
CPLVQEDSNIMNVALPLAIIIEHLSEKTLETLKSYWSSLSATILIRHIMVFKNALTFILK
NGLLQTHNPGTKLLLKALKLLYKANKSGQSFKVPLSNFYLEESTATGTLNAFVDVALWLS
LSKVEDNEQTPAIFCRYPFVFPLICKVAVFNILARVMKESHHVVHEMGMPWPVEFLGNTL
DSPVPVLQLNLRRTHMVEDTFRHLAAADHAAFKRELVVQFVDDRKIMNVNKKDFFLHVFD
ELMAPESQMFMYNESQTLAWFPPKVKVEERKYFLFGVLCGLALYNHNIIHLKFPLALFKK
LLRVKTSLDDMKEFDPVMAESWRCMLEDYTPEVVEAMEMTFTVSWGGEKAELDPNEPGKS
VTGSNRKEFVAAFVNHAFNKSVEGVFKLFKEGFFKVCNIDVVEFFQPEELQTVVVGQENY
DWEVFKENTVYEGNYHADHPTIITFWKVFENLSAEEKKKFLLFLTGCDRVPFLGMKCIRM
RVAMMPDATEIHLPESLTCHTLLLLPNYKRYPVERTMEARLLQAINHNRGFWKN
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgttttgttggggagacagttcgagtggacagtttggggtccaggcaaccctt
agcccggtgtcctggaccgggcccggagtcctaaccaacatctgctgcggagagcagcac
accttattcctcagagaagacggaaaagttttatcatgtggacacaactcgcagggccaa
cttggacgaaggaaccaaagtggaaagatgcttggatctgtggagggactcggtgatgtt
gttgccatggcttgtggtcaggaccattctctggctttatgtgcttctggacatgtgttt
tcttggggggcaggagatgatggacagcttgggcttgcacaagggcaccccagcaacaac
cagagaccaagtcgagtgcccatcccaatgcccataccggtaatccaggtggcttgtgga
aactcccactcccttgcattgaccaaaggaggagatgtcttctcctggggtttaaacagt
catgggcagttgggcctggggaaggacgtgacactgcagcagagacctgtcctggtgtgc
gccttgaccggagttgcagtaacccaggtttcagcaggaggaagccacacactgttcctc
acgctctccggcctgacgtactgctgtggggccaataaatctggccagctggggctcaac
agggtggatgaaaaaggcaggttcaacgtctgcatggtacctgctctcagacctctgggt
gtctcttccatcagctgtggagaatcgcacactgctgtgttgacaaaggatgggaaagtt
ttcactttcggagacgggagccacggtcaactcggtcacaatgcctccaccaccgaggtt
cggcccaggctggttgatggtcttggagagacggcatcccaggttgcatgtggaagacgt
cacactctcgtgttgacttcttctggacgtctgtttgcttttggtaatggggacaaaggc
cagctggggacaggacagcgagacagcagctcgtccccctccctagttcagcttccatgg
gcctctgacagtgctgctgccacacctagtgacttgaagttatcagctggatgggacaca
aacttcatttacacttcacctgcaaagaccttcaaccatggacaaataattggccggttg
gatgagaaaaaattgcaaaagtgggtggcaatgaagtacagtaacatcgaggcaaaaaga
gaaatcgagtcgatgttttacacaagttcaagtcttgttgcaagtttcacaaaacccgaa
ggagctccgctggaagctggtgctctaactgtggacctggaggctgcttgtcaggccttc
gaccagatgctggcagtcccatggatcaagcaaacagtaaatctggagctcctgatagaa
ttgctcattctctcaagacatcctttaaagtctccggagattctcctgattttgctgaca
tgtccgctggtacaagaagactcaaacatcatgaatgtggctttgcctctggctatcatt
attgagcatctcagtgagaagactctggaaacattaaaaagctattggtcgtctttgtcg
gccaccattttgatcaggcacatcatggtcttcaaaaacgccctgactttcattctgaag
aacggcctgttgcaaacccacaacccaggaaccaaactgctgctgaaagccctgaagctc
ctttacaaagcgaacaaatctggacagtctttcaaagtcccactgagcaacttttatctc
gaggaaagcactgctacgggaactcttaatgcatttgtggatgtcgctctttggttgtcg
ctttccaaagtagaggacaacgagcaaacacccgccattttctgtcgctaccccttcgtt
ttccctctgatttgtaaagttgctgtcttcaacatcttggcacgtgtgatgaaggaatct
catcatgttgttcatgaaatgggtatgccgtggcctgtggagtttcttggaaacaccctg
gactcccctgtcccggtgctgcagctgaacctgagacgaactcacatggtggaggacacc
ttcagacatcttgctgcagccgatcacgctgcatttaaaagagagcttgtggtgcagttt
gtagatgacaggaagatcatgaacgtcaacaaaaaagactttttcctccatgtgtttgat
gagctcatggctcctgaatctcaaatgtttatgtacaacgagagtcaaactctggcttgg
ttcccacccaaggttaaagtggaggaaaggaagtacttcctgtttggcgttctgtgtggc
ctggctctttacaaccacaacatcattcacctgaagttcccgctggcgctcttcaagaag
ctgctcagagtcaaaacgtccctggacgacatgaaggagtttgatcctgtcatggcagag
tcatggaggtgcatgttggaggactacacccccgaagttgtcgaagccatggagatgact
ttcactgtctcttggggtggtgagaaagctgaacttgatccaaacgaacccggaaaatct
gtcactggatctaataggaaagaatttgtcgctgcctttgtcaaccatgcctttaacaaa
tcagtggagggagtgtttaaactcttcaaggaagggtttttcaaagtgtgcaacatagat
gtcgtggagttcttccagcctgaggaacttcagacagttgtggtgggccaggaaaactac
gactgggaggtcttcaaggagaacacagtttatgaaggaaactatcatgctgatcatcca
accatcatcaccttttggaaggtgtttgaaaatctctcggcagaagagaagaaaaagttc
ctcttgttcctcacaggctgtgacagagtccccttcttgggaatgaagtgcatcaggatg
agagtggccatgatgccagatgccacagagatccacttgcctgaatccctcacctgccat
accttgctgctgctgcccaactacaagcgatacccggtagagaggacgatggaggccagg
ctccttcaggccattaatcacaacagaggtttctggaagaactag
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