Xiphophorus maculatus (southern platyfish): 106700070
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Entry
106700070 CDS
T02923
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
106700070 (nphp4)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
106700070 (nphp4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
DUF2155
Motif
Other DBs
NCBI-GeneID:
106700070
NCBI-ProteinID:
XP_014329411
Ensembl:
ENSXMAG00000005185
UniProt:
M3ZSK4
LinkDB
All DBs
Position
1:7580198..7754456
Genome browser
AA seq
1441 aa
AA seq
DB search
MADSWEELFHKNRLVPPSSQTVRLAVESHLTANHGFQLSFSRLTVAQLPQDLSAGEDVTY
QLRVTLYDGKLQHFFGKTWKSSSQKMKNNKISFNEVLYLHTSLLLPSTLVVVELVSLSTK
PDGSYLSLGRGFSILELFTNRPEGPGTNGDRRLNLHHGSPRGLLHPSLKDSVDYGNLLKV
IDGAHLDCVMKMHPSLNSAVHLLPEHALVSGEDNIPGLIPSPTGDALLRPQLLKMTPFTL
DKLTISLQPSLEKFESLLLQLINADCQNTKQPEPEDAQRTVVIQERRLHVGVHNGWCFLD
KPQVVVLEPFASGVRGRTDSTSKKSTLVKDSSATSSRPQMLGLRSSLEIKMANNQALAII
FQLEYVFSAPIGRETMLSTTSTSRAAFLQCLRWGIWCPFQELAHWKDKEVQLVLQGGAKP
NPLRVMVYSTEASVQTHSPAAVSAPNTVQERSEAKDVIRFWLFSSLEKKPSSPRVSLRTK
QEDVPRQRSSPSPSRKQVTPTSPPESPRGPGLSLSQLAATSRYPTISHSSSSLPWQQSFP
SLLHPSPLASAHQLSHVACSAVSSITHLEMDLQREGGKMTSKDEEGDHLQELPFTPIHAP
VITLGVNVPSSCSVSSRSSLAHLFSAGFPEILDCSGQVAEVLDPTEPMPFDPQREEADLL
QGNLLVFEFLAFTRIPGAGVESDWPRNIYVTFQFYRFPPVTSQQLKLLTSDKVRPKANEA
LPCVLATINKDGSVNTGSPGLQIQFRVDDDFLRPREKRWFLRHLALHTMHIDVWDSESLL
LIGSTAIELKCLLRQGKPAVQALHELEILTTDYVEEDTLLPDADQHLRSTSTAMTVCTIV
RGRLHIRTGSIGCPADPSRKRAADGISSYSHIITPREVTTGFKGGSLSTRNILQLNARNT
AQEHRLDGDAALLNRNRIRARDITPEVQNLNTDSRRRKLDCMAAVHRLEAKENTKAADVT
GLNPATRLIREHQPSDEYSKAEGIANMLSQAITTQHLLYANLGSAEYMEFVLKNPFNVPQ
TVTIHSDDSELSVITDTEEWRYFKAITKTSTPLEENMFHVEEAAPGPRVYLRPKESVHIP
LKYQSFLCNHITSVQGPSFLPTGKGSQMAKKTLSNIINAKIIKVTFRAEDGKPMAICQVN
VEPTPHVVDQTFRLYHPELCFLKKAIRLPPWEGSTAEDPNSCPHISVHCSDPNIICQTRM
LVPGEPQDVYLKVPGSPSPHIKMFFVMVFTDKWKAAPSQIWQVYVHFLERVDVSCVTGQR
TCQSLVLRGKQAVRKIKCFLSHPKEIEVDPAGVFVLPPAAVQELQLRVQPWQAGSRFLYV
NAVDVDQQRLVAAWLLCLSVHRPVLSKAFEVSVPAGNGRGSSRKITYTNPYTSTRTFLLR
SDHPDLLQFREDQFQIGGGESYTIGLRFAPSQSSGSAEILVYVNNSEEKTEETFCVKVNY
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagctgggaagaattgtttcacaagaaccggttggttcccccgtccagccaa
acagtccgcctggctgtggagagccacctcaccgctaaccatggctttcagctcagcttc
agccggcttactgtagcgcaactcccgcaggatctgtcagctggggaagatgtgacctac
cagctgcgagtgactctgtatgatggaaaactccagcacttttttggaaaaacatggaag
agctcatcccaaaaaatgaaaaacaacaagatttccttcaacgaggttttgtacctgcat
acgtccttgctgttgcccagcactctggtcgttgtggagctagtgtcgctatcaaccaaa
ccagacggctcctatctgtctctggggagaggcttcagcattctggagctttttaccaac
agaccagagggtccaggtactaatggagacagaaggctgaatctacaccatggatcacca
agaggcctcctccacccctcactgaaggactcagttgactatggcaacctactgaaggta
attgatggagcacatttggactgtgtgatgaaaatgcatccttcactgaattctgcagtg
catctgcttcctgagcatgctcttgtatctggagaggacaacatacctgggctcattcct
tctccaacaggagacgctttgctgaggcctcagctgctcaagatgacgcccttcaccctg
gataaactgaccatttccctccagccttccctggagaagtttgagagccttctgttgcag
ctcatcaatgctgactgccaaaacacaaaacaacctgaaccagaggatgcacaaagaacg
gttgtcattcaagaacggaggcttcatgtcggtgttcacaatggctggtgtttccttgat
aagccccaagtggtggtcctggagccctttgcatcaggagtcagaggacgaacagacagc
acctctaagaagagcacgctggtcaaggacagctctgcaacatcatcacgtcctcagatg
ctgggccttcgcagcagcttggagatcaaaatggccaataatcaggctttggcaatcatc
tttcagctagagtacgtcttctccgctcccataggccgagagactatgctgtctactacc
tccacatcccgagctgccttcttgcagtgccttcgttgggggatttggtgccccttccag
gagctagctcactggaaagacaaagaggtccagcttgttctgcaaggaggtgcaaagccg
aatcctctcagagtgatggtctacagcacagaggcgtctgtccagactcacagccctgct
gcagtctcagctccaaacacagtccaggaacgctcggaggcaaaggatgtgataagattt
tggctgttttccagtttggaaaagaagccatccagccccagggtatctctgaggactaag
caggaggatgtgccacgtcagagatcatcaccttcaccaagtcgaaaacaggtcactccc
acctctcctcctgaatccccgcgaggccccgggctctctctgtctcagctggcagctact
tcacgctacccgaccatcagccactccagctcgtcgttaccgtggcaacagtcatttcct
tctctgctccatccttccccattggcatcagcccaccagctgtcacatgtcgcctgctca
gctgtcagcagcatcacccacctggagatggaccttcagcgggaaggcggcaaaatgacc
tccaaggacgaagaaggggatcatcttcaagagctgcccttcacccccatccatgctcct
gtcattactctgggagtgaatgtgccgagctcctgctcagtcagctccaggagctctctg
gcacaccttttctctgccggctttcctgaaatccttgactgcagcgggcaggtggcagaa
gtcctggacccaactgaacctatgcccttcgatcctcagcgggaggaggctgacctttta
cagggaaacctgctggtgtttgagtttctggcatttaccagaataccaggagcaggagtt
gaaagtgactggcctcgcaacatctatgttaccttccagttttatcgctttccccctgtc
acctcacagcaacttaagctgttgaccagcgataaggttcgacccaaagctaatgaggca
cttccttgtgtcttagccactatcaacaaagacggatctgttaatactggttctccaggc
ctgcagattcagttcagagttgatgacgatttcttgaggccaagagaaaagcgctggttc
ctccgccacctggccctccataccatgcacatcgatgtttgggacagtgagtcattgctc
ctcattggttctaccgccatagagctcaagtgcttgctgcgtcaggggaagcctgccgtc
caggctcttcacgagttggagatcctgaccacagattatgtggaagaggatactttactg
cctgacgcagatcagcatctgcgttcaacatccaccgcgatgacagtttgcaccattgtc
agaggacggctccacatacgaacgggcagcataggatgtccagctgaccctagcaggaag
agagcagcagacgggatatcatcttattctcacatcatcacgcctcgtgaagtcaccacc
ggctttaaaggaggaagcctgtcaacccgaaacatccttcaacttaatgcaaggaacacg
gcacaagaacacaggctggacggagatgcggcgctgttgaacagaaacagaatcagagct
cgggacatcacccctgaagtacaaaacctgaacaccgacagcagacggcgaaagctggac
tgcatggctgcagtgcatcggctggaggctaaagagaacacaaaagcagccgatgttacg
ggtctaaatccagcaactcggttgatcagagaacatcaacccagcgacgagtacagcaag
gcagagggaattgcgaacatgctgagccaggccatcaccacacagcaccttctctatgcc
aacctgggctctgctgaatacatggagtttgtcctgaagaatccctttaacgtgcctcag
accgtcaccattcacagcgatgactctgagctcagtgtcatcactgacactgaggagtgg
cgttacttcaaagcaataacgaaaacctctaccccgctggaggagaacatgtttcacgtg
gaagaagcagctcctggtcccagggtttatctccggcctaaagaaagtgtccacattccc
ctgaagtatcagagcttcctgtgcaaccacatcacatctgtccagggaccaagcttcctg
cctacaggcaaaggttcccagatggccaagaagacgctgtccaacattattaatgccaaa
attatcaaggttacattcagagcagaagacggcaagccaatggccatctgccaggtgaac
gtggagccaacgccccacgttgtggaccagactttccgactttaccaccctgaactttgt
ttcctgaaaaaggccatccgcctgccgccgtgggaaggctcaacagccgaagacccaaat
tcctgccctcatatttctgtgcactgcagtgaccctaatatcatctgccagacgaggatg
ctggttcctggagagcctcaggatgtgtacttaaaagtaccagggagtcccagtccgcac
ataaagatgttctttgtcatggttttcactgataagtggaaggcggcgccctctcagatc
tggcaggtttacgtgcattttctggagcgggtggacgtcagctgcgtgactggccagaga
acctgtcaatcactggttctgaggggaaaacaggccgttcgcaagatcaaatgtttcttg
tcacaccccaaagaaattgaggtggacccggccggtgtgtttgttttgcctcctgccgct
gtgcaggagctccagctaagggttcagccatggcaggctggcagccgcttcctgtatgtg
aacgctgtggacgtggatcagcaaaggctggtcgccgcctggctcctgtgtctcagtgtc
caccgtcctgtactgtcaaaggcattcgaagtgtctgtcccagctggtaatgggcgtggc
agctccagaaaaattacgtacaccaacccttacaccagcacacggacattcctgctccgc
tccgaccatcctgacctgctccagttcagagaggatcagttccagattggcggtggagag
agttacacgatcggattgcgattcgctcccagccagagttcgggctcggcggagatcctg
gtttacgtcaataactcggaggagaaaaccgaggaaacattctgcgtcaaagtcaactat
tcttga
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integrated database retrieval system
