Xiphophorus maculatus (southern platyfish): 106700315
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Entry
106700315 CDS
T02923
Name
(RefSeq) hemicentin-1-like
Organism
xma
Xiphophorus maculatus (southern platyfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_2
ig
Ig_3
I-set
C2-set_2
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
106700315
NCBI-ProteinID:
XP_023182551
LinkDB
All DBs
Position
21:16301092..16317221
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AA seq
1701 aa
AA seq
DB search
MDLRRTEKAAVLLVVPVREMKKLCHLSNRILIVSILLIVFFLPGAFAHCGGVLNQHMYTP
SEIEALIGSCVEIPCKFGTLKGFDNSKPTYGIWMKHMPVYDVGASEIIFNSSGSINTHQM
EMIGDLRRKNCSTRIPDVKADLTDKYFLRIENGEAKATFCEDSFKLTVIDSPWTPSIVVF
GSDLKENQSVTLTCSVYTPCLPSPPELTWNLKKHSLGQILKKTDGTFTTKLQETITLSDK
HDGYNISCTARYPVKGGFKQSESVRTLSVSYAPKDTSATTSPSYLVSKGSRVALSCSSRG
NPPITSYTWFKHRKRGDIKLSVAPVYSFFATERANYYCEAKNMLGSEKSKTICIDIIDAP
LTPRIDIPFGDLKEGQSVTITCSASTPCPHSPPKLTWNLQQDSLRQTERNADGTFTTKIQ
KNITLSDTHDGYNIRCSSRHPAAEKSNIAKTEVTLSVSYAPRNTSASISPSALVSAGSRV
ELNCSSRAKPPPSFTWFRNSKQGVTKVSVEQVYSFSATPTEEGDYYCDSTNELGSEKSES
ICIDIGDAPLTPRIDIPFGDLKEGQSVTITCSASTPCPHSPPKLTWNLQQDSLRQTERNA
DGTFTTKIQKNITLSDTHDGYNIRCSSRHPAAEKSNIAKTEVTLSVSYAPRNTSASISPS
ALVSAGSRVELNCSSRAKPPPSFTWFRNSGRGFITVASVFSMSFNAAERGDYYCEATNTL
GSEKSKRICLDLIDAPLTPRIDIPFGDLKEGQSVTITCSASTPCPLSLPELTWNLQQDSL
RQTEKNTEGIFTTNIQKNITLSDTHDGYNIICSSRHPAAEKSNTAKTEVTLSVSYAPRNT
SASISPSALVSAGSRVELNCSSRAKPPPSFTWFRNSGRGFIKVASVFSMSFNAAERGDYY
CEATNRLGSEKSKRICLDLIDAPLTPRIDIPFGDLKEGQSVTITCSASTPCPLSLPELTW
NLQQDSLRQTEKNTEGIFTTNIQKNITLSDTHDGYNIICSSRHPAAEKSNTAKTEVTLSV
SYAPRNTSASISPSALVSAGSRVELNCSSRAKPPPSFTWFRNSGRGFIKVASVFSMSFNA
AERGDYYCEATNTLGSEKSKRICLDLIDAPLTPRIDIPFGDLKEGQSVTITCSASTPCPL
SLPELTWNLQRDSLRQTEKNTEGIFITNIQKNITLSDTHDGYNIRCSSRHPAAEKSNAAK
TEVTLNVPYAPRNTSASISPSALVSAGSWVELNCSSRAKPPPSFTWFRNSGRGFITVASV
FSMSFNAAERGDYYCEATNTLGSEKSKRICLDLIDAPLTPRIDIPFGDLKEGQSVTITCS
ASTPCPLSLPELTWNLQQDSLRQTEKNTEGIFTTNIQKNITLSDTHDGYNIRCSSRHPAA
EKSNAAKTEVTLSVSYAPRNTSASISPSALVSAGSRVELNCSSRAKPPPSFTWFRNSKQG
VTKVSVEQVYSFSATPTEEGDYYCDSTNELGSEKSESICIDIGDAPLTPRISISTCNLRE
GQSITVTCSASTLCPHSLPELTWNLQQDSLRQTERNADGTFTTKIQENITLSDTHDGYNI
KCFTGHPAARKSNAAKTEVALSVSYAPKNTSASISPSEGHYVELNCSSRAKPPPKITWFK
KGPERTTEVATGNFHKVKFTDGDQYYCVAENKVGKQKSSPINLTVKGTNGLGAWILAIIG
AVGMVLLGSTIFILDTWFIHS
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggacctacgacgaacagagaaagctgcagttcttttggttgttccagtcagagagatg
aagaagctctgtcacctgtctaacagaatcctgatagtcagcattttactgattgtcttc
tttcttccaggtgcttttgctcattgtggtggtgttctaaaccagcacatgtatacacca
agtgagattgaagctctgattggatcttgtgtggaaatcccatgtaaatttggtactttg
aaaggatttgacaacagcaaacccacttacggaatctggatgaaacatatgccagtatat
gatgtgggagcaagtgaaattatttttaacagcagtgggtcaattaacacccatcaaatg
gaaatgattggagatttgagaaggaaaaactgcagcactcggattcctgatgtaaaagca
gatcttacagacaagtacttcttaagaattgagaacggggaagcgaaagcaacattttgt
gaagattcttttaagttaacagttatagattctccttggactcccagcattgttgttttt
ggaagtgatctgaaggagaatcagtctgtcactctaacctgctcagtttatactccctgt
ttaccttcacctcctgaactcacctggaatctcaaaaaacactctctcggacaaatactg
aaaaagactgatggaacctttacaactaaactccaggagaccatcactctgtcagacaag
catgatggatacaacatcagctgtactgctagatatcctgtgaaaggaggattcaaacag
tcagagtcagtaaggactctcagtgtttcatatgctcctaaagacacctcagctaccacc
agtccatcatatttggtgtcaaaaggtagcagggtggcgttgagctgctccagcagaggc
aaccctcccattaccagctacacctggttcaagcaccgcaaacgtggagacattaaatta
tctgtggcgccggtttacagcttctttgctactgagcgagcaaactattactgtgaggcc
aaaaatatgcttggtagtgagaaatcgaaaaccatctgtattgacatcattgatgctcct
ttgactcccagaattgatatcccttttggtgatctgaaggagggccagtctgtcactata
acctgctcagcttcaactccgtgtccacactcacctcctaaactcacctggaatctccaa
caagactctctcagacaaacagagagaaacgcagatggaacctttacaactaaaatccag
aagaacatcactctgtcggacacacatgatggatacaacatcagatgttcttccagacat
cctgcggctgaaaaaagcaacatagcaaagacagaagtgactctcagtgtttcatatgct
cctagaaacacctcagcatccatcagtccatcagctttggtgtcagcaggtagcagggtg
gagctgaactgctccagcagagccaaacctccacccagcttcacctggttcaggaacagc
aaacaaggagtcactaaagtgtctgtggagcaggtttacagcttcagtgctactcctact
gaagaaggagactattactgtgattccacaaatgagcttggtagtgagaaatcggaaagc
atctgtattgacatcggcgatgctcctttgactcccagaattgatatcccttttggtgat
ctgaaggagggccagtctgtcactataacctgctcagcttcaactccgtgtccacactca
cctcctaaactcacctggaatctccaacaagactctctcagacaaacagagagaaacgca
gatggaacctttacaactaaaatccagaagaacatcactctgtcggacacacatgatgga
tacaacatcagatgttcttccagacatcctgcggctgaaaaaagcaacatagcaaagaca
gaagtgactctcagtgtttcatatgctcctagaaacacctcagcatccatcagtccatca
gctttggtgtcagcaggtagcagggtggagctgaactgctccagcagagccaaacctcca
cccagcttcacctggttcaggaacagcggacgtggattcattacagtcgcttcagtgttc
agtatgagcttcaatgctgctgagcgaggagactattactgtgaggccacaaatacgctt
ggtagtgagaaatcgaaacgcatctgtcttgacctcattgatgctcctttgactcccaga
attgatatcccttttggtgatctgaaggagggccagtctgtcactataacctgctcagct
tcaactccgtgtccactctcacttcctgaactcacctggaatctccaacaagactctctc
agacaaacagagaaaaacacagagggaatctttacaactaatatccagaagaacatcact
ctgtcggacacacatgatggatacaacatcatatgttcttccagacatcctgcagctgaa
aaaagcaacacagcaaagacagaagtgactctcagtgtttcatatgctcctagaaacacc
tcagcatccatcagtccatcagctttggtgtcagcaggtagcagggtggagctgaactgc
tccagcagagccaaacctccacccagcttcacctggttcaggaacagcggacgtggattc
attaaagtagcttcagtgttcagtatgagcttcaatgctgctgagcgaggagactattac
tgtgaggccacaaataggcttggtagtgagaaatcgaaacgcatctgtcttgacctcatt
gatgctcctttgactcccagaattgatatcccttttggtgatctgaaggagggccagtct
gtcactataacctgctcagcttcaactccgtgtccactctcacttcctgaactcacctgg
aatctccaacaagactctctcagacaaacagagaaaaacacagagggaatctttacaact
aatatccagaagaacatcactctgtcggacacacatgatggatacaacatcatatgttct
tccagacatcctgcagctgaaaaaagcaacacagcaaagacagaagtgactctcagtgtt
tcatatgctcctagaaacacctcagcatccatcagtccatcagctttggtgtcagcaggt
agcagggtggagctgaactgctccagcagagccaaacctccacccagcttcacctggttc
aggaacagcggacgtggattcattaaagtagcttcagtgttcagtatgagcttcaatgct
gctgagcgaggagactattactgtgaggccacaaatacgcttggtagtgagaaatcgaaa
cgcatctgtcttgacctcattgatgctcctttgactcccagaattgatatcccttttggt
gatctgaaggagggccagtctgtcactataacctgctcagcttcaactccgtgtccactc
tcacttcctgaactcacctggaacctccaacgagactctctcagacaaacagagaaaaac
acagagggaatctttataactaatatccagaagaacatcactctgtcggacacacatgat
ggatacaacatcagatgttcttccagacatcctgcggctgaaaaaagcaacgcagcaaag
acagaagtgactctcaatgttccatatgctcctagaaacacctcagcatccatcagtcca
tcagctttggtgtcagcaggtagctgggtggagctgaactgctccagcagagccaaacct
ccacccagcttcacctggttcaggaacagcggacgtggattcattacagtcgcttcagtg
ttcagtatgagcttcaatgctgctgagcgaggagactattactgtgaggccacaaatacg
cttggtagtgagaaatcgaaacgcatctgtcttgacctcattgatgctcctttgactccc
agaattgatatcccttttggtgatctgaaggagggccagtctgtcactataacctgctca
gcttcaactccgtgtccactctcacttcctgaactcacctggaatctccaacaagactct
ctcagacaaacagagaaaaacacagagggaatctttacaactaatatccagaagaacatc
actctgtcggacacacatgatggatacaacatcagatgttcttccagacatcctgcggct
gaaaaaagcaacgcagcaaagacagaagtgactctcagtgtttcatatgctcctagaaac
acctcagcatccatcagtccatcagctttggtgtcagcaggtagcagggtggagctgaac
tgctccagcagagccaaacctccacccagcttcacctggttcaggaacagcaaacaagga
gtcactaaagtgtctgtggagcaggtttacagcttcagtgctactcctactgaagaagga
gactattactgtgattccacaaatgagcttggtagtgagaaatcggaaagcatctgtatt
gacatcggcgatgctcctttgactcccagaattagtatctctacttgtaatctgagggag
ggccagtctatcactgtaacctgctcagcttcaactctctgtccacactcacttcctgaa
ctcacctggaatctccaacaagactctctcagacaaacagagagaaacgcagatggaacc
tttacaactaaaatccaggagaacatcactctgtcagacacacatgatggatacaacatc
aaatgtttcaccggacatcctgcggctagaaaaagcaacgcagcaaagacagaagtggct
ctcagtgtttcatatgctcctaaaaacacgtcagcatccatcagtccatcagaaggtcac
tatgtggagctgaactgctccagcagagccaaacctccacccaaaatcacctggttcaag
aaaggcccggaaagaaccactgaagtagctacaggcaactttcacaaggttaaattcact
gatggcgatcaatactactgtgtagctgaaaataaggtgggaaaacagaaatcatcaccg
atcaatctcacagtaaaaggtacaaacggacttggagcctggattcttgcaataataggg
gccgtgggaatggtacttcttggcagtacaatcttcatccttgacacctggttcattcac
tcctaa
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