Xiphophorus maculatus (southern platyfish): 106700316
Help
Entry
106700316 CDS
T02923
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xma04990
]
106700316 (sned1)
Domain-containing proteins not elsewhere classified [BR:
xma04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
106700316 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
EGF_Teneurin
EGF_3
Motif
Other DBs
NCBI-GeneID:
106700316
NCBI-ProteinID:
XP_023196027
LinkDB
All DBs
Position
9:complement(25812813..25897403)
Genome browser
AA seq
1303 aa
AA seq
DB search
MLLLVLQALLPCFCTLLPGVEPAVSLEDFYPFGPDQGDAQTTAQDDGGSGLREISVAFPF
FGDRHSGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRLAGSVFYRQSQ
DASVLRRASGDVRTYFAEFPDFNATWVLISTWHQVTFFGGNSQTPVNTFQVVLITDGELS
FTIFQYNNITWTTGRHASSGGNLVGLGGIAAQAGFNAGDGRRYFNIPGSRTADVVGLEET
TNVGYPGRWVFRIDDANVEVGGCSSASVCPHLRPCLNGGQCIDDCITGNPSFTCSCLAGF
TGRRCQINVNECVSNPCQNGGSCKDRINGFICECPPGYMGVHCQTDIDECEDRPCLNNAS
CIQGNGNFTCVCEPGFTGVRCETDINECESQPCLNGGECVDQVTGFTCACLAAFTGIFCE
TELMNSTEPHNQTVECLCQNGGVCVGINGTCECPPGYTGAYCQLGITQTLCSNSRTCPDG
SPCLEYGGAYLCTCHIGVEPDHMDFYPVQPQSVCDSSPCLNGGYCYERDGGYTCECRYGY
SGKHCEKVRLNTCASSPCRNGGSCKEEGGSYRCVCPYRFTGKHCEVGKPDPCSSTPCQNG
GTCFHYLGKYKCECTVEYSGKDCQISRSSLRPSAEINECLSQPCLNGGSCQNKIGSYKCV
CKDGFRGKSCQIDTNECLSEPCMNKGTCEDQPGSYLCRCPQGFKGQNCEIEQDGCESSPC
LNGGVCRGYRQYYVCTCKDGFFGERCQMLEDPCVLKPCGTRGSCWSDRRGNYNCVCKVGL
TGKDCEKDLLPPSGLHVLRVEENEVELRWDQPDHSHRVLSMFAVTYAPLGNSTPKTDYLD
KQRSTYVLRDLDPGMLYNISTVSIKLKAYGNDTSQPATALIRTRPQRVEKLQLLNVSSSQ
AWLSWLVEAAHHAAVSRVHVSLMPADGTEPLTVALNSSVTEHTFSSLQAGHMYTVDVLTQ
SGIRPDEFPSTSHSAGPLQFWTRPYPPQNLSLSHVTPNSALITWSRHPRHVPDGFVINVT
RGLNTRSRFLPNGKLGSYTLRELTPGHHYYVALMSVKNTGQEQIHSIPQHLSFTTCQTWE
EGAAHGNGTWDPDRAHISHISPSRPGRQHGNKELRRAVQCLFLCCRYTELVDRRGKITAR
FSHLTPKVIRHRTRPPPIRLEKMEETTNKLSLALEMEEKALRTQPESPQDCRSLPCQNGG
TCVNERGSVVCSCATGFKGRQCELLCQRVPHPCTRLFSETKSIPVWEGGVCHYQYKRTYK
VQQDVCYQEICEPVKSQSKHNKLSAHKASWMLMKVITVMWRTS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctggtgctgcaagccctcctgccctgcttctgcaccctgctgcccggggtg
gaacccgccgtgtccctggaggacttctaccccttcggtcctgaccagggggacgcccag
accaccgcccaggacgatggaggctccgggctccgggaaatctctgtcgccttcccgttc
tttggtgacagacactcgggactctacgttaacaacaacggtcttgtgtctttcctgagg
gaggtctctcagtttacaccggtggcttttccaattgctggcgacagaagggtggtggcg
ccgttctgggccgatgtggacaaccgtctggcagggagcgtcttctacaggcagagccag
gacgcttccgtcttgaggagggcttcaggtgacgtcaggacgtacttcgcagagttccct
gacttcaacgcaacatgggtgctcatttctacttggcaccaagtcactttctttggagga
aactcccaaacgccggttaatactttccaggtggtgctgattacagacggagagctttcc
tttaccatattccagtacaataacatcacttggacaacagggaggcatgccagcagtgga
ggaaaccttgtggggttaggggggattgcggcacaggcaggctttaacgctggcgacggc
aggcgctacttcaacatcccgggctctcgcaccgccgatgtggtcggcttagaggaaacg
accaacgtcggctacccgggcagatgggtcttcagaatagacgacgcaaacgtggaagtg
ggaggctgcagctctgcctcggtgtgtccgcacctgcgtccgtgcctgaacggaggccag
tgcatcgatgactgtattacaggcaacccctccttcacttgctcctgcttggctggcttc
accgggcgccggtgccaaatcaatgtcaacgagtgtgtttccaatccgtgccagaatggt
gggagttgtaaagatcggattaatggtttcatctgcgagtgtcctcccggatacatgggg
gttcactgtcaaacagacattgacgagtgcgaagacagaccatgccttaacaacgcgtcg
tgcatacaaggcaatggcaatttcacctgtgtgtgtgagccgggtttcaccggggtgcgt
tgtgagacagacataaacgaatgtgaatcccagccgtgtctgaatggaggagaatgcgtg
gatcaggtgaccggcttcacctgcgcgtgtctcgctgcgttcactgggattttctgcgaa
acagagctgatgaactccactgagccacacaaccaaacagtagaatgcctttgccagaat
ggaggcgtctgcgtgggcatcaatggaacctgtgaatgccctccaggctacaccggagcc
tactgtcagcttggaataactcagaccctgtgcagtaacagcagaacatgtcctgatgga
agtccctgtttggagtatggaggagcttatctttgtacgtgtcacattggagtagagcct
gatcatatggacttttaccctgtacagccccagtcggtctgcgactcctcgccttgtctg
aacggcgggtactgctacgaacgagacggaggctacacctgcgagtgcagatatggatac
tctggcaaacattgtgaaaaagttagacttaatacatgtgcgtcgagcccctgtcgtaat
ggaggctcctgtaaggaagagggagggagctacagatgtgtatgtccttacagatttact
ggaaaacactgcgaagtgggaaagccagacccctgttcctccactccctgccaaaacggt
ggaacgtgttttcactacctaggaaagtataaatgtgaatgcactgtcgaatacagcgga
aaagactgtcaaataagccggagctcactacgtccctctgcagagattaacgagtgctta
tcacagccttgtctcaacggcggttcttgtcagaacaagattgggtcctataagtgtgtc
tgcaaggacggctttaggggaaaaagctgtcagattgacacaaatgaatgcctgtctgag
ccctgcatgaacaaggggacatgtgaggatcagcctggttcctacttgtgtcgctgtcca
caaggcttcaaaggccagaactgtgaaatagagcaagatggttgtgagtccagcccctgt
ctgaacggaggcgtgtgtcggggttacagacagtactacgtgtgtacgtgtaaagacggt
ttctttggggaacgctgccagatgttggaggacccatgtgtgctgaaaccttgtggaact
cgaggcagctgctggagtgacaggagaggaaactacaactgtgtctgcaaagtgggcctc
acaggcaaagactgtgagaaagacctgttacccccgtctggtctccatgtactgcgcgtg
gaggagaacgaggtggaactgcgctgggatcagccagaccactcccaccgagtgctcagc
atgttcgctgtgacctacgcccccctgggcaacagcacccccaaaacggactacctggac
aagcagcgctccacttacgttctgcgggacctggatcccggcatgctgtacaacatttcc
accgtctccatcaaactcaaagcttacggcaacgacacgagccagcctgccactgcgcta
attcgcacaagaccgcagcgggtggaaaagctgcagctgctcaatgtgtcgtcctcgcag
gcctggctgagctggctggttgaggctgctcatcatgcagccgtcagcagggtgcatgtc
tctttaatgcctgcagatgggaccgagcctctcactgttgcactcaactcgagcgtcact
gagcacactttcagttcattacaggctggtcacatgtatacagtggatgttttgactcaa
agtgggatcaggcccgatgaatttccttccaccagtcactcagcaggacctctgcaattc
tggacaaggccttatcccccacagaatctttccctgtcgcatgtgacccccaattcagcg
ttgatcacctggagccgccatccgagacacgtcccagatggttttgtgatcaacgtaacc
cgtggtctgaataccaggagtcgcttcctgcctaatgggaagttaggttcgtacacactc
cgtgagctgacaccaggacatcactactacgtcgctctcatgtctgtcaaaaacacggga
caggaacagatccacagcataccgcagcacttatcttttaccacctgtcagacctgggag
gagggagcggcccacggtaacgggacttgggatccagaccgtgcgcatatttcccacatc
tcaccctcaagacctgggcggcaacacggaaataaagaactcagaagagctgttcagtgt
ttgttcctgtgttgcagatacactgagctggttgaccggagggggaagataacggctagg
ttttcccacttaacgccaaaagtgatccgacatcgtaccagacctccacctatcagatta
gaaaagatggaagaaacaacaaacaaacttagccttgcattagagatggaggaaaaagct
ttgagaacacagcctgagtcgccccaggactgccgcagtctgccctgccagaacggaggg
acgtgtgtgaacgaaaggggctccgtcgtgtgcagctgtgcaacgggtttcaagggcaga
cagtgtgaactgttgtgccagcgagtgccccacccatgcacccggctcttctctgagact
aaaagcatacctgtctgggagggtggagtgtgccactatcagtacaaaaggacatataag
gtacagcaggacgtgtgctatcaggagatttgtgagccagtgaaaagtcaaagtaagcat
aacaagctgtctgctcacaaagcaagctggatgctgatgaaagtcatcactgtcatgtgg
agaacctcctag
DBGET
integrated database retrieval system
