Xiphophorus maculatus (southern platyfish): 111605897
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Entry
111605897 CDS
T02923
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111605897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
111605897
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111605897
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111605897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
TRAF3_RING
zf-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111605897
NCBI-ProteinID:
XP_023181332
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All DBs
Position
20:21100742..21104333
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AA seq
552 aa
AA seq
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MSAKFQENEQAMKVETNNMVLPVKQSNHCTSTAETLPPRKLKGEAQESCLLPLNHFWYMS
RIYKEGIKQIERKNKIKLVAQVHVTFEAEQEDGNPHEALNEFIDLSQSCSADSGEAVIPL
KFVDPDQWSDALKVIKRNKDKLLLTMSSEEVIVSGPKQSQDEFNAVLNAMQKTNTPAEQH
KPTSDGTSLRINLTTSQLTKSPTVEDNKQLENSEGKQEGTTNQQTKSPTVEHNKQLENSE
GKQQGTTSQQTKSPTVENNSEPVITSVEDANVKAKSDLNVESSNSKNKQSLQTCRAKPSI
RNLLLKKKPIARPLRLTRRSDTTGLGDLPKKSSCENERKEDSSQPSLIPPTAQQKAEAST
KTGASGDSKDDLCPICLDRLIKKKQLKCKHTFCDECLQASVQHTGPMCPVCKDVFGVMEG
DQPDGVMTWINSSSFLPGFSGCGSIMITYTFPNGKQTKKHPNPGQPYQGTTRTAYLPDNE
EGQEVLKLLKKAFDQKMTFTIGTSRTSGLDNQVIWNDISHKTSKTGGPQSFGYPDPSYLS
KVKEDLKAKGIE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaagtttcaggaaaacgaacaggccatgaaggttgaaaccaataatatggtc
ctccctgtcaaacagagtaatcactgcacctcgacagcagaaacccttcctcctagaaaa
cttaaaggagaagctcaagaaagttgccttctgccactgaatcacttctggtacatgagt
cgcatctacaaggaaggaattaaacagattgagaggaagaataaaattaaactggtggca
caggtccatgtgacatttgaagctgaacaggaagatggaaaccctcatgaagctctcaat
gagttcattgatctctcacagagctgctctgctgattcaggtgaggcagtgattcctctc
aagtttgtagatccagatcagtggagtgacgcattaaaagtcatcaagagaaacaaggac
aaacttttgctcaccatgtcatctgaagaggttattgttagtggtccaaaacaaagccaa
gatgaattcaatgcagtcctgaatgcgatgcagaagacaaacacacctgctgaacagcac
aaacctacatcagatggtacatcactgaggataaacttgacaaccagccaactgacaaaa
tctccaacagtggaagacaataagcaactggagaacagcgaaggaaaacaggagggaaca
accaaccaacagacaaaatctccaacagtggaacacaataagcaactggaaaacagcgaa
ggaaaacagcagggaacaaccagccaacagacaaaatcaccaacagtggaaaataacagc
gaaccggtaattacttctgttgaagatgctaacgtcaaagctaaatctgatctgaatgtt
gaatccagcaacagtaaaaacaaacaatccctccaaacatgtagggccaaaccttccatc
agaaacctcttgctgaaaaagaagcctatcgcacgtcccctgcgcctaacccgacgtagt
gataccactgggttgggtgacttgccaaagaaatccagctgtgagaatgagaggaaagag
gactccagtcaaccttcactgatcccaccaacagcacagcaaaaggctgaagcatcaact
aagacaggagcatcaggggacagtaaagatgatctctgcccaatatgcttggatcggttg
atcaaaaagaaacaactaaagtgtaaacacacattttgtgatgagtgcctccaagcgtca
gtacaacacactggacccatgtgtcctgtatgcaaagatgtttttggtgtgatggaggga
gaccagcctgatggagtaatgacatggatcaatagctcttcgttccttcctggattctca
ggctgtggcagcataatgatcacatacacttttcctaatggaaaacagacgaaaaagcat
cctaatcctggacaaccatatcagggaactaccagaactgcatatcttccagacaacgaa
gagggccaagaagttctgaaactgctgaaaaaagctttcgaccagaaaatgactttcact
attgggacgtccagaacaagcgggttggacaaccaggtgatctggaatgatatttctcac
aagacatcaaagacaggaggaccgcagagttttggatatcctgaccccagttacctgagc
aaagtaaaggaggacctgaaagctaaaggcatagagtga
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