Xiphophorus maculatus (southern platyfish): 111606143
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Entry
111606143 CDS
T02923
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111606143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
111606143
03009 Ribosome biogenesis [BR:
xma03009
]
111606143
03036 Chromosome and associated proteins [BR:
xma03036
]
111606143
Enzymes [BR:
xma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
111606143
Messenger RNA biogenesis [BR:
xma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
111606143
Ribosome biogenesis [BR:
xma03009
]
Eukaryotic type
90S particles
RNase
111606143
Prokaryotic type
rRNA processing factors
111606143
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
111606143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Motif
Other DBs
NCBI-GeneID:
111606143
NCBI-ProteinID:
XP_023181636
LinkDB
All DBs
Position
21:1945720..1965141
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AA seq
721 aa
AA seq
DB search
MSFQPDRGGLRGQMPPGQNYLSPPAPQPPAPPYRYDPQTPPGSGYHGSAGCMPHHPDFMQ
YPPPAPSQQTPGALRQCPLRPPFPKPPPNFPPPPLPSSAGGPTPGSQVSVQTSYPPYMMP
PPPLPHPTMPPPMSYHPPYPMNYPPFPPPPFNPGYTQTAGPFQPDHGLRHGGPYPYEKSA
DSRRSPERGYRYDDHRQKSYGERHRMEFSGERKERGRSPDRRGRPEGGRYKADYDRGRSP
PRHRSRERSRERYRHRDVRRSQSPDRYRKRPRSRSTSRERKRGRWEEEKERRSDSSSGPS
RERSYSSLRSRDNDEAFGERDRQRDREKEKYDEEEEQLKPAWIRCTHAESYYSNDPMDQV
GDSTVVGTSKLRDLYERFEDELVKRQERAKAARPRWEPPKTKLDEDPDDSSSESDCESDG
DGSSCSSSSDSEVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIR
HSIYPGEEPVKQCRPMNNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFS
HTPLTNIPLCRVIRFNIDYTIHFIEEMTPENYCVRGLELFASYLFRDILELYDWNLTGPD
CDSESSGCQRFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKALVPEEEIADMLQWEQL
DWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDP
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccagccggaccgtgggggtctgaggggacagatgcctcccggccagaactac
ctgagccctcccgctccccagcctcctgctccaccgtaccgttacgacccacagactccg
ccgggttcgggttaccatggcagcgccggctgcatgccccaccaccctgacttcatgcag
taccctcccccggctccgtcgcagcagacccccggcgctctgaggcagtgcccgctgcgc
ccgcctttccccaaaccacctcccaatttcccgcctccccctttgcccagctcagcaggg
ggtcctactcccggctcccaggtgtctgttcagacctcctaccccccctacatgatgcct
ccgcccccactgcctcacccaaccatgcctccgcccatgagctaccaccccccgtacccc
atgaactaccctcctttccctcctccgcccttcaaccctggctacacccagaccgctggc
cccttccagccggaccacggcctgcgacacggggggccgtacccgtacgagaagtccgcc
gacagccggaggtcaccggaaagagggtatcgctatgacgaccacaggcagaagagctac
ggcgagcgacacagaatggagttcagcggagagaggaaggagcgcgggaggagtcccgac
cggcgcgggaggccggagggagggcgctacaaagctgactacgacagagggaggagtccg
ccgcgacaccggagccgggagaggagcagggagcggtaccgccaccgagatgttcgtcga
tcccagtcacctgatcggtacaggaagagacctcggagccgctcaacgagccgagaaagg
aagcgagggcgctgggaggaggagaaggagcggaggtcagacagctcctcggggccgagc
cgggagcggagctactcgtccctccggagccgggacaacgacgaggcgttcggggagcgc
gatcggcagcgggacagagagaaggagaagtacgacgaggaggaagagcagctgaaaccc
gcctggatccgctgcactcacgccgagagctactactccaacgaccccatggaccaagtg
ggcgactccacggttgtgggaaccagcaaactgcgcgacctttacgaacgcttcgaggac
gaactcgtaaagaggcaggaacgagccaaagccgctcgacccagatgggagccgcctaaa
accaaactggacgaggatccagacgacagcagcagcgagtcggactgcgagtcggacggc
gacggcagcagctgctccagcagctccgactccgaggttttcgacgtcatcgctgagatc
aagcggaagaaggcgcatccggaccgtctgcatgaggagctgtggtacaacgacccgggg
cagatgaatgatggccccctgtgcaagtgcagcgccaaggccagacgaacggggatccgc
cacagcatctaccccggagaggagcctgtgaagcagtgccgtcccatgaacaacaacgcc
gggaaactgttccactacaggatcaccgtgtctccccccaccaacttcctgaccgaccgg
ccgacagtgatagagtacgatgaccacgagtatctgttcgaaggattctctctgttctcc
cacactcctctcaccaacattccattgtgccgagtgatccgcttcaacatagattacacc
attcacttcatagaggagatgacaccggagaactactgcgtccgaggtttggagctgttc
gcctcctacttgttccgggacattctggagctttacgactggaacctgacgggtcctgac
tgcgactcagagtcttctggatgccagcgcttccatttcatgcctcgttttgtcagattc
ttaccggacggcgggaaggaggttctgtcgatgcaccaggtgctgctgtacctcctgcgc
agcagcaaggcgctggttccagaggaggagatcgcagacatgctgcagtgggagcagctg
gactggcagaaatacgcagaggagtgcaaaggcatgatcgtcaccaaccccggcatgaaa
ccgagctcggtgcgcatcgaccagctggacagggagcagttcaacccagacgtcatcacc
ttccccatcatcgttcacttcggcatccggcccgctcagctcagctacgccggagaccct
cagtaa
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