Xiphophorus maculatus (southern platyfish): 111607605
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Entry
111607605 CDS
T02923
Name
(RefSeq) uncharacterized protein LOC111607605 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xma04054
]
111607605
Pattern recognition receptors [BR:
xma04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111607605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
NLRC4_HD2
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111607605
NCBI-ProteinID:
XP_023185160
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Position
24:complement(12542076..12559981)
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AA seq
1404 aa
AA seq
DB search
MACTSQSALEYVENARLHLVGELKSLSVILENLCQQKVLIDEEVSKIKAEKDDYDRTRAL
LDSVIRKGEEACYRFLRIIDQTRRRTLERPTPLFKNSHEASTEATKFDLDHWISCFPFKE
DAEMQQNYIRGPRPCCNYQKKLKSKAKKLLENFWRTSKDLFGEDKKPDLFYSALVFDIQG
KISPSKIKKFKNYKSKKSRPKKLRTYIPENKAEISPSDLLKTDKNILLVGKPEIGKTALS
HEILRLWSERDSKELDYMFFFDMRELTDIPPITSLEDLLFTACSEPDEGKDEVLHDIKSN
SDNVTVILDGVTDFSTSVVEKLIDKDLLPDAKIIITCRPEDEEYLCPEDWLRVEVKGFSE
ETIKTYLSSTLGEDHRKVLSNVELLTLCHVPMYALLVAASFSSEDSLQPRTVTEIYINIV
RFGLQMNSNKTRIRNLNQFIKTKRNGILSLAEAAFNATERKTVNLGELSCEDSCVLSFLK
TLDVKVPPTETKTLYAFLHYTMQEFFAALWLLENPDNIREVFQQCLTEEKKHMKHLIPFM
CRLLNEKSPRLMSCLIPAEEIKETSGWFFKEIIDTFFSKDEDTELDVDILFLCQCLYESQ
SSENCITFLDKLDFHLDLSGENLDPYSCCAVAYVVTQSKERKISLNLQDVTMSQQGMRHL
FGCIENVQWFDGRSCDPDEQTRFLVNLFCAAAEREQQTGEKMVEMLASVCRYKTFPLYHS
DKPQSDFLLDLYSQMKDRENKSGPSLLPSLQSVFQSAPEVWTIKLSERKTSILLEVMKLQ
PEKKPVELTDCSHGESEVRSFLQCLPFISHLWFDGRSCDPDEQTRFLVNLFCEAAEREQQ
TGEKMVEMLASVCRYKTFHLYYNNKSQSDFLLDLYSQMKDRETKSGLSLLPSLQSVFQSA
PKLWTIKLSKRKTSDLMEVMKLQPEKKPVMLTDCSHGESEVRSFLQCLPFISQLSSPPGF
FQSVCSSLSVRSREEIQQLVSLLQLLNFNLFLTGELNDKTCSSVGKVLPLVGSKVDLILT
DSRMSVRGAAVLFRSTTQLHSLRLSNSLVLFFSQWVRRGRVAFPLVLEELTVVSTKAQPQ
RVLLKVGSSLASLLRFWTVGRLDLTESGLPVQSLFSLLLHDGPLTLRLSEERLQQLLVLL
HEVQDQDRTLSLLNKVGGDLSSCQLSWELLHFLLQQPTAQTITVNLKKNRFSEERAAELL
PFLHRMVIQRPSPSFVRTSIREIFRTHPSHMISWLLRSLDLVINLNCTELDSKDCDALLF
ILRHSDGVKLKLLWSSIPAEGIQSILSMLHTVSDLSVDRNLLLRFIHCCAASDSQQGAAS
GLLRTLRHRLDLSCSSCVELPEEDQTEPLRLTAADCGAVSTVLRHSSRDTQLDLRDCEVE
DSGLDLLFPVLDGHISIFQDAWWC
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcacgtcacagtcagccttggaatatgttgagaatgccagacttcaccttgtt
ggagaattaaagagtctctcagtgattcttgagaacttgtgtcagcaaaaagttctcatt
gatgaagaggtcagcaagataaaggcagagaaagatgactatgacagaaccagagcatta
ctggactcagtcattagaaaaggtgaagaagcctgctacaggtttctaaggattattgac
cagacgaggaggagaaccttagagagaccaactcctcttttcaagaacagtcatgaagct
tcaactgaggctacaaagtttgacctggaccactggatcagctgctttcctttcaaagaa
gatgcagaaatgcagcaaaactacatacgaggtccaaggccatgctgcaattatcagaag
aagttaaaatcaaaagcaaaaaaattattagagaacttctggaggacaagtaaagatctt
tttggagaagacaagaagcctgatctgttttacagtgcacttgtatttgatatccaagga
aagatttctccatccaaaataaagaaatttaaaaactataaaagcaagaagtcccgtcct
aaaaagttaaggacttatattccagagaataaagcagaaatctcccccagtgacctgctg
aaaacagataaaaacatcctcctggttgggaaacctgaaattggaaagacagcgctgagt
catgaaatattgagactgtggtcagaaagagacagtaaggagctggattacatgtttttc
tttgatatgagggaattaaccgacatcccaccaatcacgagtttggaggatcttcttttc
actgcatgcagtgaaccagatgagggcaaagatgaagtcttacatgacataaagagcaac
tctgataacgttacagtcattttggatggagtcactgatttctctacatcggttgtggag
aaacttatagacaaagatctcttacctgatgctaaaatcatcattacctgcagaccagaa
gatgaggaatacctttgtcctgaagactggctcagagtggaggtgaaaggcttcagtgag
gaaacaataaaaacatatttgtcttcaactctgggtgaagatcacaggaaggtcctgagt
aacgtggagctgttgactctttgtcatgttccaatgtatgcactgttggtggctgccagc
ttttcatcagaagactctctgcagcccagaactgtgactgaaatatacatcaatattgtt
cgatttggtcttcagatgaacagcaacaaaaccaggatcaggaacctcaatcagttcatc
aaaaccaagagaaacggaatcctgtctctggccgaagctgcttttaatgcaaccgaaaga
aaaactgtgaacctgggagaactttcctgtgaagacagctgcgtcctttccttcctgaaa
acacttgatgtaaaagttcctcctactgaaaccaaaactctctatgctttcctccattac
accatgcaggagttttttgcagctctgtggcttttggagaatcctgataatatcagggag
gttttccagcagtgcctcactgaggagaagaaacacatgaagcatctgatcccgttcatg
tgccgtttgttgaatgagaagagtccacgtttgatgagctgtttgattccagctgaggag
atcaaggaaacatctggatggttcttcaaagagataattgacacatttttctccaaagat
gaagacactgaacttgatgttgatatactgttcttatgccaatgtttatacgagtcacag
agctccgaaaactgtattacctttctggacaaactggacttccatcttgacctcagtgga
gagaatctggacccttattcctgctgtgctgtggcctatgtggtcactcagtcaaaggaa
aggaaaataagtctgaaccttcaggatgtgacgatgtctcagcaaggaatgagacatctg
tttggatgtattgaaaatgttcaatggtttgatggtcgaagctgcgatcctgatgaacaa
accaggttcttagtgaatctgttctgtgcagcagcagagagagaacagcagacaggagag
aagatggtggagatgttagcatcagtctgcagatataaaacattccctttatatcatagt
gataaacctcagagtgacttcctgctggatctgtactcccagatgaaggacagagagaat
aaatcaggtccgagtctccttccatcattacagtcagttttccagtcagctcctgaagtc
tggaccatcaagctgtcagagagaaagacctccatcctgctggaagtgatgaaactccaa
ccagagaagaaaccagtggagctgacagactgctcacatggagagagtgaagtgaggagt
ttcctgcagtgtctgccttttatctcacacctctggtttgatggtcgaagctgcgatcct
gatgaacaaaccaggttcttagtgaatctgttctgtgaagcagcagagagagaacagcag
acaggagagaagatggtggagatgttagcatcagtctgcagatataaaacattccattta
tattataataataaatctcagagtgacttcctgctggatctgtactcccagatgaaggac
agagagactaaatcaggtctgagtctccttccatctttacagtcagttttccagtcagct
cctaaactctggaccatcaagctgtcaaagagaaagacctcagaccttatggaagtgatg
aaactccaaccagagaagaaaccagtgatgctgacagactgctcacatggagagagtgaa
gtgaggagtttcctgcagtgtctgccttttatctcacagctcagttctcctccagggttt
ttccagagtgtttgttcatctctatcagtgagatccagagaggagatccagcagctggtt
tctctcctgcagcttctgaacttcaacctttttctaacaggagagttgaatgataaaacc
tgcagctctgtggggaaagttctccccctggttggatctaaagtggatctgatcctcaca
gacagccggatgtccgtcagaggagctgctgtcctgtttagatctacaacacagctccac
agtctgagactctccaacagtctggtcttgttcttctctcagtgggtgagaagaggcaga
gtggcttttcctctggtcctagaagagcttacagtggtttccaccaaagctcagccacag
agagtcttgctgaaggtcggcagcagtttggcgtctctgctgaggttctggacagtggga
cggttggacctgaccgagtccggactccctgttcagagtctcttcagtctgttgcttcac
gacggtcctctcacactcagactgagtgaagagagactccagcagcttctggttctcctc
cacgaggtccaggaccaggacaggacattgtccctcttgaataaggtcggtggagacctg
agctcctgccagttgagctgggagcttcttcacttcctgctgcagcagccgacagctcag
accatcaccgtgaacctgaagaagaaccgattctcggaggagagagctgctgagctgctg
cccttcctgcacaggatggtgattcaaaggcccagtcccagctttgttaggacttccatc
agggagatcttcaggactcatcccagtcacatgatatcctggttgctgaggtcactggat
cttgtgatcaacctgaactgcacagagctggactcaaaggactgcgacgctctgctgttc
atcctcagacacagcgacggagtgaaactgaagctgctgtggagctccatcccagcagag
ggaatccagtccatcctctctatgctgcacacagtttctgatctcagtgtggacaggaat
ctcctgctgaggttcatccactgctgcgccgcctccgacagccagcagggggcagcatcg
ggcctgctgaggactctacggcacaggttggatctgtcctgctcctcctgcgtggagcta
ccagaggaggatcagacggagcctctgaggttgacggccgccgactgcggggccgtctcc
accgtcctgagacacagcagcagggacacccagctggacctgagagactgcgaggtggag
gacagcgggctggacctgctgtttcctgtcctggacggacatatttctatatttcaagat
gcctggtggtgttga
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integrated database retrieval system
