Xiphophorus maculatus (southern platyfish): 111608000
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Entry
111608000 CDS
T02923
Name
(RefSeq) gastrula zinc finger protein XlCGF8.2DB-like
KO
K09191
general transcription factor IIIA
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
111608000
03021 Transcription machinery [BR:
xma03021
]
111608000
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111608000
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
111608000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_15
zf-LYAR
Zap1_zf1
zf-C2H2_16
zf-C2H2_jaz
Zf-C2H2_ZNF451_2nd
zf-C2H2_11
C2CH-3rd_BIRD-IDD
DUF2180
zf-C2H2_8
zf-C2H2_3rep
zf_C2H2_ZHX
zf-UBP
zf-C2H2_5
zf-C2H2_STOP2_C
zf-AN1
zf-H2C2_5
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
111608000
NCBI-ProteinID:
XP_023185917
LinkDB
All DBs
Position
Unknown
AA seq
229 aa
AA seq
DB search
TGEKPFSCVNCGKSFSQKRDLTRHMMIHTGEKPFSCVKCGKSFSQKQHLTRHMMIHTGEK
PFSCVNCGKSFCQKQVLTQHMKIHTGEKPFSCVNCGKGFSQKQNLTQHIMIHTGEKPFSC
VTCGKSFGYKQHLSRHMMIHTGEKPFSCVNCEKSFSQKQHLTLHMMIHTGEKPFSCVNCG
KSFSDKQHLSRHMMIHTGEKPFSCVTCGESFRHKVSLIHHLRRHTGEKQ
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
acaggtgaaaagccgttttcatgtgtgaactgtggaaaaagttttagtcaaaaacgggac
ttaactcggcacatgatgattcacactggtgaaaagccgttttcatgtgtgaaatgtgga
aaaagttttagtcaaaaacagcatttaactcggcacatgatgattcacactggtgaaaag
ccgttttcatgtgtgaattgtggaaaaagtttttgtcaaaaacaggttttaactcagcac
atgaagattcacactggtgaaaagccgttttcatgtgtgaactgtggaaaaggttttagt
caaaaacagaatttaactcagcacattatgattcacactggtgaaaagccgttttcatgt
gtgacctgtggaaaaagttttggttataaacagcatttaagtcgtcacatgatgattcac
actggtgaaaaaccattttcatgtgtgaactgtgaaaaaagttttagtcaaaaacagcat
ttaactctgcacatgatgattcacactggtgaaaaaccattttcatgtgtgaactgtgga
aaaagttttagtgataaacagcatttaagtcggcacatgatgattcacactggtgaaaaa
ccattttcatgtgtgacctgtggagaaagttttcgtcacaaggtgagtttaattcaccac
ttgaggcgtcacacaggtgaaaagcagtag
DBGET
integrated database retrieval system
