Xiphophorus maculatus (southern platyfish): 111609427
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Entry
111609427 CDS
T02923
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xma04054
]
111609427
Pattern recognition receptors [BR:
xma04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111609427
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
AFG1_ATPase
LRR_4
Motif
Other DBs
NCBI-GeneID:
111609427
NCBI-ProteinID:
XP_023193653
LinkDB
All DBs
Position
8:complement(3914609..3930466)
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AA seq
1064 aa
AA seq
DB search
MSKGAIIDFKSPGSPPSESRIHQIFTQEESEPSCVSFRSDGSMNRLIHFKSPGPPSSERV
DQQSSEVPSCPSALQQQTQMDSIFKTLEDNIVTFVKNELKKIQKVLSPDNKERSESQRDD
DEVLEGEDEEQRRSNREALMKITLNFLRRMKQEELADRLQSKQFAAVCQHQLKFGLKKKF
QSVFEGIAKAGSPTLLNQIYTELYITEGRTGEVNDEHEVRQIETASRKPDRPETSIRQED
IFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEGKAHQNIQFIFPFTFRELNVLK
EKKFSLVELVHHFFTETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTDATESTSVD
VLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVDMVTEVRGFNDPQKEEYFRKRFRDKQ
QASWIISHMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPRTLTEMYILFLVVQA
KVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGINIRAASM
YSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMVETQTPKKFLL
FNKPKIISLQQRAVDQALQSPNGHLDLFLRFLLGLSLPTNQRLLQGLLTQTGSSSQTNQK
TVQYIKEKINENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDKLSPAQWSALI
FILVSSGKDLDVFDLKKYSASEEVLLRLLPVVEASNKALLSGCNLSERSCEALSSVLSSQ
SSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLASALTSNPS
HLKELDLSYNHPGDSGVKLLLAGLKDPHWRLEALRVEPIGVPFLTPGLRKYSCQLTIDTN
TVSRNLKLSEDNRKVTRVEELQSYPDHPDRFDTWTQLLCRTGLTGRCYWEVEWRGDVDIS
VNYRRIRRKGNSKNCLFGYNHHSWSLICSDDGYCVWHNNIVTRLSTSSVSNRVAVYVDCP
AGILSFYRVSSDSLILLHTFNTTFTEPLIPGFGFNYYGSSVFLC
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagggtgcaatcattgactttaaatctcctggatctccaccatcagagagcaga
atccatcagattttcacacaagaagaatcagaacccagctgtgtgtcgtttaggagcgac
ggttcaatgaatcgtctcattcactttaaatctcctggacctccatcatcagagagagtg
gaccagcagagctcagaggttcccagttgtccatctgccctgcagcaacaaacacagatg
gactccatatttaagacgttggaggacaacattgtcacttttgtgaaaaatgagctgaaa
aagattcagaaggttctcagtcctgataacaaagaacgttcagagagtcagagagatgat
gatgaggtgttggaaggtgaggatgaagagcagaggaggagcaacagagaagcactgatg
aagatcacactgaactttctgaggaggatgaagcaggaggagctggctgaccgtctgcag
agcaaacaatttgctgcagtttgtcaacatcaacttaaatttggtctgaagaagaagttc
cagtctgtgtttgaggggattgctaaagcaggaagtccaacccttctgaaccagatctac
acagagctctacatcacagagggaaggactggagaggtcaatgatgaacatgaggtcaga
cagattgaaacagcatccaggaaaccagacagaccagaaacatcaatcagacaagaagac
atctttaaagtcccacctggaagagatcaaccaatcagaacagtgatgacaaagggagtg
gctggcattgggaaaacagtcctaacacagaagttcactctggactgggctgaaggcaaa
gcccaccagaacatccagttcatatttccattcactttcagagagctgaatgtgctgaag
gagaaaaagttcagcttggtggaacttgttcatcacttctttactgaaaccaaagaaatc
tgcagctttgaacacttccaggttctgttcatctttgatggtctggatgagagtcgactt
cctctggacttccacaacaaggagatcctgactgatgctacagagtccacctcagtggac
gttctgctgacaaacctcatcagggggaaactgcttccctctgctctcctctggataacc
acacgacctgcagcagccaatcagatccctcctcagtgtgttgacatggtgacagaggtc
agagggttcaatgacccacagaaggaggagtacttcaggaagagattcagagataagcag
caggccagctggatcatctcccacatgaagacatcacgaagcctccacatcatgtgccac
atcccagtcttctgctggatcactgctacagttctggaggatgtgttggagaccagagag
ggaggagagctgcccagaaccctgactgagatgtacatcctcttcctggtggttcaggcc
aaagtgaagaaggtcaagtatgatggaggagctgaaacagatccacactggagtccagag
agcaggaagatgattgagtctctgggaaaactggcttttgatcagctgcagaaaggaaac
ctgatcttctatgaatcagacctgacagagtgtggcatcaatatcagagcagcctcaatg
tactcaggagtgttcacacagatctttaaagaggagagaggtctgtaccaggacaaggtg
ttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgttcatctgacc
ttcatcaactctggtgtcaacctgatggtagaaacacaaacacctaagaagtttttgtta
tttaataaacctaaaataatttctctccagcagagagctgttgaccaggccttacagagt
ccaaatggacacctggacttgttcctccgcttcctccttggactttcactcccgaccaat
cagagactcctacaaggtctgctgacacaaacaggaagtagctcacagaccaatcagaaa
acagttcagtacatcaaggagaagatcaatgagaatgtgtctgcggagaaaagcatcaat
ctgttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacagtct
ctgagttcaggaagtctctccacagataaactgtctcctgctcagtggtcagctctgatc
ttcatcttagtgtcatcaggaaaagatctggatgtatttgacctgaagaaatactctgct
tcagaggaggttcttctgaggctgctgccagtggttgaagcctccaacaaagctctactg
agtggctgtaacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccag
tcctccagtctcagagaactggacctgagtaacaacaacctgcaggattcaggagtgaag
cttctctctgctggactgaagagtccaaactgcaacctggaaactctcagcttatcaggc
tgtttggtctcagaggaaggctgtgcttctctggcctcagctctgacctccaacccctcc
catctgaaagagttggacctgagctacaatcatccaggagactcaggagtgaagctgctg
ttggctggactgaaggatccacactggagactggaagctctcagggtggagcctattgga
gtcccattcttgacaccaggtctgaggaagtattcctgtcaactcaccatcgacacaaac
acagtgagcagaaacctcaaactgtctgaagacaacaggaaggtgacacgtgtggaggag
cttcagtcatatcctgatcatccagacagatttgatacctggactcagctgctgtgtaga
actggtctgactggtcgctgttactgggaggtcgagtggagaggagatgttgatatatct
gtgaattacagaagaatcaggaggaaaggaaacagtaaaaactgtttgtttggatataat
catcattcctggagtctgatctgctctgatgatggttactgtgtctggcacaataacata
gtaactcgtctctccacctcctctgtctctaacagagtagcagtgtatgtggactgtcct
gctggcattctgtccttctacagagtttcctctgactcactgatcctcctccacaccttc
aacaccacattcactgaacctctgattcctggatttgggttcaattattatggttcctca
gtgtttctgtgctga
DBGET
integrated database retrieval system
