KEGG   Xiphophorus maculatus (southern platyfish): 111609934
Entry
111609934         CDS       T02923                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2 isoform X1
  KO
K24823  protein PAT1 homolog 2
Organism
xma  Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:xma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xma03019]
    111609934 (patl2)
Messenger RNA biogenesis [BR:xma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111609934 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 111609934
NCBI-ProteinID: XP_023197191
LinkDB
Position
10:complement(4176842..4187296)
AA seq 583 aa
MFEDPAVIRIVEGRPSLMSLDSAIVDCGHAVFRNTSVDDRTTPPYWKNRRVSGSILQDSA
IVCVISHRGRGQHVNSDFLDLPYPVSSYGVHRGGPRRSYSRRVFGQRGPSQINAPVMPRS
PIFSRQPLTPRQHLNQTGRFMFPPNHSCPSTPRPLIPKTMQLRFGANSPRPSPFYSPSTN
PVQPFSSFPGPVTQLHPQHKQLLSQKQRLFHRKCEGWDPYSNLMTDKEKEWIIRLQMIQL
QSENPYLEDYYYQEYYRRLEAKMAEEELGIRSKKEPPKLTTPYITKTDAYTPVVHIEGSL
GQVAVSTCYSPRRAIGAVHAVQTHNPLEEQKDTRQQRLEILSKIEKLLIALLEVEETERM
KTAVLSEAEEIRLMEKTQRKVEHIYSQLQQHNAPDSGDEFLPFLSVSKGKKLLARLLPFL
KNDSALKVLHIVASNLPTLISRDTEEDLPVLYPSLRNVIGVLTFSQLINVLKDLTSSESP
STFECLSLTCQNKFGLSLLYALLSHGEKLLSSGVPLEPSIGDFETWTDMIFQVAGQLSQC
SLVEPLLLPSNLLTLFCRYLDKRTVHQLKSNLESATSCLVLPS
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtttgaagacccggccgtgataaggatagtggagggacgaccgagcctcatgagtctg
gacagcgccatagtggactgtggacacgccgtgttcaggaacacttctgtggatgatagg
acgacgcctccttactggaaaaaccgtagagtttctggatcaatactccaggacagcgcc
atagtgtgtgtgatcagtcacagagggcggggtcagcatgtgaactctgacttcctggat
ctaccatatcccgtctcttcctacggagtccatagaggaggacccagaagatcgtactcc
aggagggtgtttggccaaagagggccctctcagattaatgcaccagtgatgccaagatca
cccatcttctcacggcaacccttgaccccacgacaacacttgaatcagacgggaagattc
atgttccctccaaaccactcttgcccctccactcctcggcctctgattccaaagaccatg
cagcttcgcttcggtgccaactctcccagaccgtccccgttttacagcccgtccaccaac
ccggtgcagccgttcagcagtttccccggtccagtcacgcagctccatcctcaacataaa
cagcttctcagtcaaaagcagcgtctgtttcacagaaaatgtgaaggctgggacccttac
tctaacctcatgacggacaaagaaaaggagtggatcatccgcctgcagatgattcagctg
caaagcgagaatccgtacctcgaggactattattaccaggagtattatcgtcgattagaa
gccaagatggctgaggaagagctgggcatcaggagcaagaaggagccacccaaactcacc
acaccgtacatcaccaagacagacgcctacacaccagtggtccacatcgaaggctctttg
ggtcaagtcgctgtctccacgtgttattctccgcgccgtgccatcggtgcagtccatgca
gtccaaactcacaaccctctcgaggaacaaaaagacaccagacaacagcgactagagatt
ctcagcaaaatagaaaagttgttaatagctttgctggaggtggaggaaactgagaggatg
aagaccgcggttttatctgaagcagaagaaataagattaatggaaaaaactcagaggaaa
gtggagcacatctactctcagctgcagcaacacaacgctccagattcaggagacgagttt
cttcctttcttgagtgtctcgaagggcaaaaagcttctcgctcgtctgctgcccttcttg
aagaacgattcagcgctgaaggtcttgcacatcgtcgcctccaaccttcctacgctgata
agcagagacaccgaggaggaccttccagttctttacccgtcactccgaaatgtgatcggc
gttctgacgttcagtcagctcatcaacgttctcaaagacctgacgtcttcagagtctccg
tcgaccttcgagtgcctctccctgacctgtcagaacaagtttggactcagcttgctgtac
gctcttctttcccacggagagaaacttctttcttcaggcgttcctcttgagcccagcatt
ggcgactttgagacctggactgacatgattttccaggtagcgggacagctgtcccagtgt
tcgctggtggagccgctcctcctcccatcaaacctgctgacgctcttttgcagatacctc
gacaagcgtactgtgcatcaactaaaaagcaacttggagtctgcaaccagctgcctggtt
ctaccatcttaa

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