Xiphophorus maculatus (southern platyfish): 111609981
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Entry
111609981 CDS
T02923
Symbol
cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54 isoform X1
KO
K25553
cilia- and flagella-associated protein 54
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
111609981 (cfap54)
Cilium and associated proteins [BR:
xma03037
]
Motile cilia and associated proteins
Sperm associated proteins
111609981 (cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
111609981
NCBI-ProteinID:
XP_023197433
LinkDB
All DBs
Position
11:17991951..18018278
Genome browser
AA seq
2557 aa
AA seq
DB search
MDLPATYYGELDEKNPVLSCFRRDTESFLKIMKQVTSTTKRDNSSYAKGIELLMKIRKEY
KQRIPERFYQEHVLQVADILCEYKLYQLALWLGYGLSLLQLSSVQITDITDVDHFMACFF
PEGFELEQGTFTIKTRAMFGCAICIFEEEKKRSILSKKGLSTLLKVLNFIRIMMQAFQQH
EHLSWLIYNGSLSIYNICRYLMSMNCSEQALEYLLWASISMELSIPLMTPRYLPLIVTLY
CSVCQCYYDNQAELQAEDFAKRALGKINDMASLEDEAECTNALTQKAYRTASLKLGVLVF
KRTVFESRKLKNTLRTKNKSTLKDIPNIPWPRTPTEQMLVNQFDCTAGQFLAISEALWES
HTRPLEIKLPDEPELLEMIIELLSAGMSILSGGTSTGEQKSDDYQSICPNVLTTESTLVD
LATEGENKIQITSAVRFIKLLFKYKQPEAFSELTKEMLHILSGAEGPPFRKAERELTLLY
SYSNLLYSQRDNTKEDKRDDRQKFLSAVSDELVGMVDTLHLCVFGPDPELRPNPDLVFDI
LIFLWKRLKHIMQSHHLEIQDSVNDQQKLQCYDKLLWCLSVLCDVAIICELANVDCIMVA
EMIHMLGEHVERVLGRINQAEGSVCGRSEDMKQSSFSILKESNTNLLKKVCEVTEKGLDA
LSKGVSALIPQDRSAITDTACMQKCKSLHPGNPSFTPAEEQNGTNKIPVKVEEEKETKGE
SKTEGHQDVESKNVFILAQDFHLGLDIIYHKASVKLMLLNEVKESDLLHRIKKNKLSKAH
LMMQKASAEHSKGEPGESSKIRSLLEEALVLVEKAELEEMKTYMATVRNVNEKKHKAEHD
EGEKAPPPPMLISRTDHSITFAPAEYDLKKRVSWYQLCGRTVQGVNPKVRLGECSLPGTG
NMVPVVSGECLLRVDGLQSNQKYVFAVAAYDSNGQLVGNSIGDTSLPVLACLPTPVLSTW
AHLAEVAFETGQHAVAKRACRKLWSQYIDPDSSSNSKHNRFASSGLHKETLQHTSPNICK
MFLNSIFTETEINIEQASLHFDTCGDRGPFIWEQEARLAETERMMLAMDLAIYLNDGGAS
LRAVVTCYRLLAPLIYHQIACDPVVQVLLKCLVVLEDNSSLMKQKWTGNSSEFLLHMVSC
ITYYLSMALQTFRKYESAAAVLDCGRSLVQEVFDTHFKFGKLVLQAGNDKAAAIAAAESQ
RKMSQLIKALHMKSIRCILSEEPLNRDHEIAWVTLEDPGVLYRLFPRLSLQDNFDNVIKL
QRKKYFLEFASLLLQRTLEEGSPELVLDWGLAIFQTLSRRDEILGLATKTVQESSKSKEG
ESSMTQRKSIAPQSVPTFEELRRKLRKKLPQSLLKNLKTLRELNIVEHLLFLMSFVVQRN
KKRIQLRNLIADERAERSFLNYCMATAHLAKFYQGMHLINEGHLDERYSQIDICWFSLAH
SGIMMRKYSLPSSEKKEELQKASDRKVDIVTPKAERKRREAVRKVIPVPKGITDENEDQH
KDTLERSSYVLLNSVENAALYFRRAMVLAHRGNHWTTLQYMCQSVWDQNHKLTAMAQNGA
LSKSLPPVTADELQAIFTPLLVLATDFTLDMLTKLQIWSLYDLDVNVEELESRLHFSHPY
DDCFLVDLRWVRTLVLYTLEQLQFCEKWETLAHFALLYNSYTRERYALMIVPLLVHAQRN
LLERISSFKGPTVPQPHHVKTENTTGKKMTNRTYAGYQLLSVWNRPPPRKQNVHKKGAKK
HLYKDPFSLKVSELHLAMSLVRVPLVVEDSLSSFREALGKRSPSLPLLQHSRSLIMQLLA
CTQPCFAPQTPTCRTRGGTSRPASQVSFSPAVVTSPDLLPEDLLDEDFSSPNAIYSLPVS
LNSAPTVAAAYTNSIKDLQANGHDSLHILALHEVGNLHFYTGNISAAHSCWRKALDCIFQ
SSGDIQQWDDVNFESSFSQNIVKKAGIWGCLQGAVLAAKIAQFILTSDIKKRTKRCRLSA
HFFKCVLYCSMAHPQKDLQYSSYSIRDELFPGIDLFSEPHRLQVDTTVASLHFVCHWLFF
TGYYITLFPILALYLHFVGPVCRDVARTAEAKILKVRALTELCMFTEAITEAIQFTQGAD
IFLPSGLRVTTANRQPVNAFCSDASLPDNVEAVEDLVNCDFTSEVCTLYGPTLCCKFNLA
RIQLILAITKSVRGSPVSDSEENSSPSSPQSQEVHTEDMAQDEQERHETEGSSPKTETPK
VVSFAKEKRESSPERIKFLLLEGASTLISSATQQLTSLTCSEAEKLELVVELNLLKANLC
LQQENYAPSSEAAVSALVLLQTSPVTVTPSPPGSKQDTKGYSAPDNLQRDMSRAVEARER
IGVLLWLRCRLTLVHCLTANIPANATLFPGKNINEEIYQVIQQGLDECLQCGDKDNQALF
LVEAVELEAQRNRIDECMAMLKEAVNLLSGRTCMPPGSVLTLARATLLFSDLKKEQSTTL
LKLTQKLLEKKLCLFDENIIWLDGNMRFSPPGPRNIYLPYLDMLNKITMKIGSVLNVGNV
EGSAFVQSSLSTPMKSQHPSDNTEKDSQAVFPPSHES
NT seq
7674 nt
NT seq
+upstream
nt +downstream
nt
atggacctaccggctacatattatggcgaactggacgaaaaaaatcctgtcctttcatgt
tttagacgcgacacggaatcatttttaaagattatgaaacaagtcacttcgacgacgaag
cgcgacaacagctcttatgctaaagggattgaacttcttatgaaaatacggaaagagtac
aaacaacgaataccagagaggttttaccaggagcacgtgttgcaggttgcagatatcctt
tgtgaatataagctgtaccagctggctctgtggctgggctacggtctcagcctgctgcag
ttgagctcagtgcaaataactgacattacagatgtggaccactttatggcttgctttttc
cctgaaggatttgaactggaacaaggcacctttacaataaagacgcgtgcaatgtttggt
tgtgccatatgtatctttgaggaagagaaaaagcgcagcatcctcagcaagaagggactc
tccacactgctgaaagtgctgaacttcattaggatcatgatgcaggcattccagcaacat
gagcatctctcctggctcatatataatggttcattgtccatttacaacatctgccgttac
ctgatgtctatgaattgcagtgagcaggctctggagtaccttctgtgggcgagtatcagt
atggagctgtccatccctttgatgacacccagatatctgccacttattgtcacactctac
tgttcagtctgccagtgttactatgacaaccaggctgaactgcaagcagaggattttgct
aagagagctcttggaaaaataaatgacatggctagcctggaagacgaggctgaatgcact
aatgcattaactcagaaagcttacagaacagcgtctctgaagcttggtgttctggtgttc
aagcggacagtcttcgaaagcagaaaacttaaaaacacgctaagaaccaaaaacaaaagc
accctcaaagatatccccaatatcccatggcctcgtaccccaacagagcagatgctggtt
aaccagtttgactgcactgcaggacaatttttagccatttcagaggcactttgggaaagc
cacacacgtccactggaaataaagctacccgatgagccagagctgcttgagatgatcatc
gagctcctctctgctggcatgagtattttgtctggaggcacaagtaccggtgaacaaaag
tctgacgattaccagagtatttgtcctaacgtactgacaacagaatccactctagtggat
ctagcaacagaaggtgagaataaaatacagattacgtctgcagtgagattcatcaaactg
ttgtttaagtacaagcagccagaagcattctcagaactcaccaaggagatgttgcatatt
ttatctggtgcggaaggtccgcctttcaggaaggcagaacgtgagctcaccttactctac
agttacagcaacctgctgtactctcagagagacaatactaaagaggacaaaagagatgac
agacaaaaattcttgtccgccgtcagcgatgagcttgttggcatggtcgacaccctgcat
ctgtgtgtttttggccctgatcctgaactgaggcctaatccagaccttgtttttgatatt
ttgatatttctttggaaaagactaaagcatatcatgcaaagtcatcacctggaaatccaa
gactctgttaatgatcaacagaagctacagtgttatgacaagttgctgtggtgtctctct
gtactgtgtgatgtggccattatctgtgagctggccaatgttgactgcattatggtggca
gagatgatccacatgttgggtgaacatgttgagagagtacttggccgtattaatcaagca
gagggatcagtttgtggaagatctgaggacatgaagcaaagctccttttctattcttaag
gagtcaaacacaaatcttctaaagaaggtgtgtgaagtgacagagaagggtcttgatgct
ttgtcaaagggtgtctctgcactgattccacaagatcgctcagccatcactgacactgcc
tgcatgcagaaatgtaagtccctacatcccggtaatccatcctttacaccagcagaagag
caaaatgggacaaataaaatccctgtaaaagttgaagaagaaaaggagactaagggagag
tcaaaaactgaaggccatcaggacgtagagtccaaaaatgtgtttatactggcccaggat
tttcatctagggctagatatcatctaccacaaggcttctgtcaaactaatgctgctaaat
gaagttaaagagtctgatttgcttcatcggatcaagaaaaataagctgtccaaagctcat
ttaatgatgcagaaagcatcggcggagcacagtaaaggggagccaggtgaaagcagcaag
atcagaagtctcctcgaggaagctctcgtcctggtagaaaaagcagagctggaggagatg
aaaacgtatatggccactgttaggaatgtcaacgaaaaaaagcacaaagcagaacatgat
gaaggtgaaaaagctccacctccaccaatgctaatctcacgaactgaccactccattact
tttgctcctgctgagtatgacttgaaaaaacgggtgagctggtatcagctttgtgggcga
acagtccagggtgtcaaccctaaagtccgccttggtgaatgcagtttaccaggaactggg
aatatggtgccagtggtttctggtgagtgtttgctcagggtagacggtctgcagtccaac
cagaagtatgtgtttgctgtagcagcctatgacagcaacgggcagctggtgggcaactct
ataggggatacatcattaccggtgctggcatgcttgcccaccccagtgctttccacatgg
gctcacttggctgaggtggcatttgaaacagggcagcatgctgtagctaaaagagcctgc
aggaaactgtggagtcaatacatagatccagacagttcatccaacagcaaacacaacaga
tttgcttccagtgggctacataaggagaccctacagcacacctctcctaacatttgcaag
atgtttctgaattccattttcactgagacagaaatcaacattgaacaggcgtctctccat
ttcgatacatgtggtgacagaggaccgtttatctgggaacaggaagccagattagcagag
actgagcggatgatgttggctatggacctggcgatatatttgaatgatggtggggcttca
ttacgagctgtagttacctgctacaggctgctggcccctctgatctaccatcagattgct
tgcgatcctgtggtgcaagtgctattaaagtgtctagtggttctggaggataattcatct
cttatgaagcaaaaatggaccggaaactcctcagagttccttttgcacatggtttcctgc
atcacctactacctgtcaatggcactgcaaacattcagaaaatatgagtcggccgctgct
gtgcttgattgtgggcggagtcttgtccaggaggtctttgatacacattttaaatttggc
aaactagttcttcaagctgggaatgataaagcagcagctatagctgcagctgagagccaa
agaaagatgagccagctgataaaagcactgcatatgaagagcataagatgcattctatcc
gaggagcctcttaacagagatcatgagattgcatgggttacccttgaagatcctggtgtt
ctttatcgactgttcccccgcttgtcactgcaggataactttgacaatgttataaagctc
caacggaaaaaatacttccttgagtttgcatcactgcttctacagaggaccttggaggaa
ggcagtccagaactggtgctggactggggactagccatttttcagactctctccagacgt
gatgaaattttgggactagccacaaaaactgtgcaggaaagcagcaaaagtaaagaagga
gagagttcgatgactcagagaaaaagtatagcacctcagagtgtgcccacgtttgaggag
ttaagaaggaagcttaggaagaaactgccacagagcttactgaagaatctgaaaactctc
agagagctgaacattgtggagcatttactgtttttgatgtcttttgtggtgcaacgcaac
aagaagcggattcagctgaggaacttaatagctgacgagagagcagagagatctttcctt
aattactgcatggctacggcacatttagcaaaattttaccagggcatgcatctgattaat
gaagggcatctggatgaaaggtatagccagattgatatctgctggttctccctcgcccac
tctggcatcatgatgaggaagtattctctgccctcttctgaaaaaaaagaggaattacag
aaggcttctgaccgtaaggttgacattgtgactccaaaagcagagaggaaacgacgggag
gctgttagaaaggttatccctgtgccaaaggggatcactgatgagaatgaggatcagcat
aaagatacactggaaaggagttcttatgtactactgaattctgttgaaaatgctgcttta
tattttcgcagagcaatggtactggcccatcgtggaaaccactggacaactctgcagtac
atgtgtcaatctgtgtgggaccaaaaccacaagcttactgcaatggcacaaaatggtgct
ttaagtaaaagtttgccgccagtcacagctgatgagctgcaagccatcttcacccctctt
ctggtgctagccacagattttacgctggacatgctgactaaacttcagatttggagtttg
tatgatctcgacgtgaatgttgaagaacttgagtcgcgtctccacttctcacacccctac
gatgactgcttcctggtggacctgcgctgggttcgaactttggtgttatacactcttgag
cagcttcaattctgtgaaaaatgggagaccctggcacactttgccttactatataactca
tacacacgggaacgttacgccttgatgatagttcctctgctggttcatgctcaaaggaac
ctgcttgagagaatttcttcttttaaaggacctacagtcccacaaccacaccatgtcaag
acagagaacaccaccgggaagaaaatgactaaccgaacttacgcaggctaccagctgctc
agtgtgtggaatcgaccccctccacggaaacagaacgttcacaaaaagggagcaaaaaag
catttatataaagatccattttcactgaaagtttcagaattgcacctcgctatgtcgctt
gtgcgcgttccccttgtcgtggaagacagcctgagctcttttcgtgaagcccttggaaaa
agatcgcccagtcttccactcctccagcatagtcgttcattaattatgcagcttttagca
tgcacacaaccctgctttgcaccacagactccaacttgtcgaactagaggaggtaccagc
cgtccagcaagccaggtgtcattcagcccagcagttgttacctctccggacctcctccct
gaggacctgcttgatgaggactttagttctccaaacgctatctacagccttcccgtcagc
cttaacagtgcaccaactgttgctgctgcttacacaaactccatcaaggacctgcaggct
aacggtcacgactcccttcacattttagctctgcatgaagttggaaacctgcacttttat
actggaaacataagtgctgcacactcctgctggcgtaaagctcttgactgcatcttccag
agctcaggtgacatccagcaatgggacgatgttaactttgagagcagcttctcacaaaac
attgtaaagaaagctggtatatggggatgcttgcaaggtgctgtgctcgctgcaaagata
gcgcagtttattttaacctctgatatcaagaagcgcacaaagcgttgtcggctgtctgct
catttctttaagtgtgtgctgtattgctccatggctcaccctcagaaggatctacaatat
tcctcatacagcattagggatgaactgtttcctggcattgaccttttttctgagccccat
aggcttcaagtcgacaccacagtagcaagtcttcactttgtttgccattggctcttcttc
acaggctactacattacgctttttcccattctagccctttacctccactttgtggggccc
gtgtgtagagatgtagcgcgcacagctgaagccaagatcctcaaggttcgtgctcttaca
gagttgtgcatgtttactgaagccattacagaagctattcaattcactcaaggagcagat
atttttcttccatctggactccgcgtgaccacagcaaatcgacaacctgtaaatgctttc
tgcagcgatgcatctcttcctgacaatgtggaggctgtggaagaccttgtgaactgtgac
tttacttcagaggtctgcacattgtatggtcctacactgtgctgcaaattcaaccttgct
cgtattcaactaatcttagcaatcaccaagtctgtacgtggcagtcctgtgtcagattct
gaagaaaattctagcccttctagcccacaaagtcaagaagtgcatacagaggatatggca
caagatgagcaggagagacatgaaacagagggatcatcccctaaaacagagacaccgaaa
gttgtctcttttgctaaggagaagagggagtcatctccagaaaggatcaagtttcttcta
ttggaaggagcttccactttgatttcctctgctacgcagcagctcacttctcttacctgc
agcgaagctgagaaactggaactggtggtggagttgaaccttcttaaagctaacctctgt
ctgcagcaagaaaactatgcaccaagctctgaggctgcagtttcagctttggtgttgctg
cagacatctcctgtcactgtgacaccatcccctcctggaagtaaacaggacaccaagggc
tacagtgcaccagacaacctgcaaagagacatgtccagggccgttgaagcccgtgagaga
attggagttttgctgtggctgcgctgccggctcactctggtccactgcctgactgctaac
atccctgctaatgcaactctttttccaggtaagaacattaatgaagaaatatatcaggtg
atacagcagggactggatgaatgtctgcaatgcggagacaaagacaatcaagctctgttt
ctggtggaagctgtagaattggaagcacagagaaacagaattgatgagtgcatggcaatg
ctgaaggaagcagtgaatctcctgtcaggacggacatgtatgccacctgggtctgttttg
actcttgctcgagccacgttgttgttcagtgacctgaaaaaagaacaaagcacaacactt
ctcaaactgacacagaaactcttggaaaagaagctgtgcctgtttgatgaaaatataata
tggcttgatggaaatatgcgtttctctccacccggacccagaaacatctacctcccttac
ctcgacatgctgaacaaaattactatgaagattggttcagtcctgaatgttggcaacgtg
gaaggatcagcatttgtccagtcatcactgtccactcccatgaagagtcagcacccatct
gataacactgagaaagattctcaagcagttttccctccaagccatgaaagctga
DBGET
integrated database retrieval system
