Xiphophorus maculatus (southern platyfish): 111610470
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Entry
111610470 CDS
T02923
Name
(RefSeq) gastrula zinc finger protein XlCGF8.2DB-like
KO
K09191
general transcription factor IIIA
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
111610470
03021 Transcription machinery [BR:
xma03021
]
111610470
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111610470
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
111610470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_15
zf-C2H2_16
zf-LYAR
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_5
Zf-C2H2_ZNF451_2nd
DUF2180
LIM
Zn_ribbon_8
DUF7479
Fer4_9
Motif
Other DBs
NCBI-GeneID:
111610470
NCBI-ProteinID:
XP_023200468
LinkDB
All DBs
Position
13:7748847..7749632
Genome browser
AA seq
262 aa
AA seq
DB search
KHMMIHTGEKPFSCVNCGKGFSHKQVLTRHMMIHTGEKPFSCVNCGKSFSQKQHLTQHMM
IHTGEKPFSCVNCGKGFSRKLSLTEHMMIHTGEKRFSCVNCGKGFSQKQYLTQHMMIHTG
EKPFSCVKCGKCFSHKRILTRHMKIHTGEKPFSCVKCGKSFGQKRILTQHMMIHTGEKPL
SCVNCGKGFSHKQVLTRHMMIHTGEKPFSCVKCGKSFSQKQYLTQHMMIHTGEKPFSCVN
CGKGFSRKLSLTEHMMIHTGEK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
aagcatatgatgattcacacaggtgaaaagccgttttcatgtgtgaactgtggaaaaggt
tttagtcacaaacaggttttaactcggcacatgatgattcacactggtgaaaagccgttt
tcatgtgtgaactgtggaaaaagttttagtcaaaaacagcatttaactcagcacatgatg
attcacactggtgaaaagccgttttcatgtgtgaactgtggaaaaggttttagtcgaaaa
cttagtttaactgaacacatgatgattcacactggtgaaaaacgattttcatgtgtgaac
tgtggaaaaggttttagtcaaaaacagtatttaactcagcacatgatgattcacactggt
gaaaagccgttttcatgtgtgaaatgtggaaaatgttttagtcacaaacggattttaact
cggcacatgaagattcacactggtgaaaagccgttttcatgtgtgaaatgtggaaaaagt
tttggtcaaaaacggattttaactcagcatatgatgattcacacaggtgaaaagccgctt
tcatgtgtgaactgtggaaagggttttagtcacaaacaggttttaactcggcacatgatg
attcacactggtgaaaagccgttttcatgtgtgaaatgtggaaaaagttttagtcaaaaa
cagtatttaactcagcacatgatgattcacactggtgaaaagccgttttcatgtgtgaac
tgtggaaaaggttttagtcgaaaacttagtttaactgaacacatgatgattcacactggt
gaaaag
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integrated database retrieval system
