Xanthomonas medicagonis: AB3X07_00020
Help
Entry
AB3X07_00020 CDS
T10867
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
xmd Xanthomonas medicagonis
Brite
Enzymes [BR:
xmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB3X07_00020 (gyrB)
DNA replication proteins [BR:
xmd03032
]
Prokaryotic type
DNA Topoisomerases
AB3X07_00020 (gyrB)
DNA repair and recombination proteins [BR:
xmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3X07_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XEB09612
LinkDB
All DBs
Position
4256..6718
Genome browser
AA seq
820 aa
AA seq
DB search
MTDEQNTPPNNGNYDANSITALEGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSIDEA
LAGHADHVAVTIHADGSVSVSDNGRGIPVGKHAQMSAKLGREVSAAEVVMTVLHAGGKFD
DNSYKVSGGLHGVGVSVVNALSEKLLLDVFQGGFHYQQEFSDGAAVAPLKQVGETSKRGT
TVRFWPSVVAFHNNVEFHYDILARRLRELSFLNSGVKIVLADERGEGRRDDFHYEGGIRS
FVEHLAQLKTPLHPNVISVTGEHNGITVDVALQWTDSYQETMYCFTNNIPQKDGGTHLAG
FRGALTRVLNTYIEQNGIAKQAKINLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSD
VRPAVENAFGARLEEFLQENPNEAKAIAGKIVDAARAREAARKARDLTRRKGALDIAGLP
GKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLAS
DQVGTLITALGTGIGRDEYNPDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELIER
GYIYIGLPPLYRLKQGKQELYLKDDNALNAYLANSAVEGAALVPASGEPPITGAALEKLL
LLFAGANDAVARNAHRYDPALLTALIDLPPLDVAQLEAEGDRHPSLEALQAVLNRGSLGT
ARYELQFEPGSEQKPAMLKVVRRHMGEELISWVPMAAFESGELRPLREVALALHGLVREG
AQIARGNKTQGIASFAQAHAWLFEEAKKGRQIQRFKGLGEMNAEQLWETTVNPDTRRLLQ
VRIEDAVAADQIFSTLMGDVVEPRRDFIEENALKVANLDI
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaacagaacaccccgcccaacaacggcaactacgacgccaacagcatcacc
gccctggaaggcctggaggcggtccgcaagcggcccggcatgtacatcggcgacgtccat
gacggcaccggtctgcatcacatggtgttcgaggtcgtcgacaactcgatcgacgaggcg
ctggccggccatgccgaccatgtcgcggtgacgatccacgccgacggctcggtgtcggtg
tccgacaacggccgcggcatcccggtcggcaagcacgcgcagatgagcgccaagctcggc
cgcgaggtctcggccgccgaggtggtgatgaccgtgctgcacgccggcggcaagttcgac
gacaacagctacaaggtctccggcggcctgcatggcgtgggcgtcagcgtggtcaacgcg
ctgtcggagaagctgctgctggacgtgttccagggcggcttccactaccagcaggaattc
agcgacggcgcggccgtggccccgctcaagcaggtgggcgagaccagcaagcgcgggacc
acggtgcgtttctggccgtcggtggtggccttccacaacaacgtggaattccactacgac
atcctggcgcgtcgcctgcgcgagctgtccttcctcaactccggggtcaagatcgtgctc
gccgacgagcgcggcgaaggccgccgcgacgacttccactacgaaggcggtatccgcagc
ttcgtcgagcacctggcgcagttgaagaccccgctgcacccgaacgtgatctccgtcacc
ggcgagcacaacggcatcaccgtggacgtggcgctgcagtggaccgactcctaccaggag
acgatgtactgcttcaccaacaacatcccgcagaaggacggcggtacgcacctggccggc
ttccgcggcgcgctgacccgggtgctgaacacctacatcgagcagaacggcatcgccaag
caggccaagataaacctgaccggcgacgacatgcgcgaaggcatgatcgcggtgctgtcg
gtgaaggtgccggacccgagcttctccagccagaccaaggaaaagctggtcagctccgac
gtgcgtccggcggtggagaacgccttcggcgcgcgcctggaggagttcctgcaggagaac
cccaacgaggccaaggccatcgccggcaagatcgtcgacgccgcgcgcgcccgcgaggcg
gcgcgcaaggcgcgcgacctgacccgccgcaagggcgcgctggacatcgccggcctgccc
ggcaagctggccgactgccaggaaaaggatccggcgctgtcggaactgttcatcgtcgag
ggcgactcggccggcggctcggccaagcagggccgcaaccgcaagaaccaggcggtgctg
ccgttgcgcggcaagatcctcaacgtggaacgcgcgcgtttcgaccgcatgctggcctcc
gaccaggtcggcacgctgatcaccgcgctggggaccggcatcggccgcgacgagtacaac
ccggacaagctgcgctaccaccgcatcatcatcatgaccgacgccgacgtcgacggcgcg
cacatccgcaccctgctgctgaccttcttctaccggcagatgccggagctgatcgagcgc
ggttacatctacatcggcctgccgccgctgtaccggctcaagcagggcaagcaggagctg
tacctgaaggacgacaacgcgctcaacgcctacctggccaacagcgcggtcgaaggcgcc
gcgctggttccggcgagcggcgagccgccgatcaccggtgcggcgctggaaaagctgctg
ctgctgttcgccggcgccaacgatgcggtggcgcgcaatgcgcatcgctacgatccggcg
ctgctgaccgcgctgatcgacctgccgccgctggacgtggcgcaattggaggccgagggc
gatcgccatccgagcctggaggcgctgcaggccgtgctcaaccgcggcagcctgggcacc
gcgcgctacgaactgcagttcgagccgggcagcgagcagaaaccggccatgttgaaggtc
gttcgccgccatatgggcgaagaactgatcagttgggtgccgatggccgccttcgagagc
ggcgaactgcgtccgctgcgcgaggttgcgctggccctgcacgggctggtgcgcgagggc
gcgcagatcgcgcgcggcaacaagacccagggcatcgccagcttcgcccaagcgcatgcc
tggctgttcgaggaagccaagaagggccggcagatccagcgcttcaagggcctgggcgaa
atgaacgccgagcagttgtgggagaccacggtcaacccggatacgcgccgcctgctgcag
gtgcgcatcgaggacgcggtggccgccgaccagatcttcagcaccttgatgggcgacgtg
gtcgaaccgcgccgcgacttcatcgaggagaacgcgctgaaggtcgccaacctcgacatc
tga
DBGET
integrated database retrieval system
