Xanthomonas medicagonis: AB3X07_03120
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Entry
AB3X07_03120 CDS
T10867
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd00020
Citrate cycle (TCA cycle)
xmd00480
Glutathione metabolism
xmd00720
Other carbon fixation pathways
xmd01100
Metabolic pathways
xmd01110
Biosynthesis of secondary metabolites
xmd01120
Microbial metabolism in diverse environments
xmd01200
Carbon metabolism
xmd01210
2-Oxocarboxylic acid metabolism
xmd01230
Biosynthesis of amino acids
xmd04146
Peroxisome
Module
xmd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xmd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB3X07_03120
09102 Energy metabolism
00720 Other carbon fixation pathways
AB3X07_03120
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AB3X07_03120
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AB3X07_03120
Enzymes [BR:
xmd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
AB3X07_03120
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Motif
Pfam:
IDH
RodZ_C
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
XEB10180
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All DBs
Position
712407..714638
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AA seq
743 aa
AA seq
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MSNTPKILYTLTDEAPYLATQSLLPIVAAFAGTAGIAVETRDISLAGRLISQFPEYLRED
QRIADDLAELGQLATTPDANIIKLPNISASVPQLKAAIKELQQQGYALPDYVDEPKDDKQ
KEAKARYDKVKGSAVNPVLREGNSDRRAPASVKHYARKHPHRMGAWSAESKSHVAHMDAG
DFYGSERSALIEQAGSVKIELVGKDGTVSVLKEKTAVQAGEIIDAAVMSKRALASFVQAQ
IADARQQGVLFSLHLKATMMKVSDPIMFGVVVGAFYQDVLDKHADTLKQVGFDPNNGIGD
LYARIATLPEAQRAQIEADLQAVYAQRPALAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGKMWNAEGKLQDTKALIPDRCYAGVYQAVIEDCKRHGAFDPATMGSVPNVGLMAQKAEE
YGSHDKTFQIASDGVVRVTDAGGKVLLEHAVEAGDIWRMCQTKDAPIQDWVKLAVERARL
SATPAVFWLDPQRAHDALMIQKVERYLQDHDTQGLDIRILTPVEATAFSLERIRKGQDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENYL
RWDSLGEFLALAASLEHLGQREDSASIGVLARTLDQANGTFLDNDKSPSRKVGELDNRGS
HFYLALYWARALATQNEDAALQARFAPLAKQLTEHEATIVAELNGVQGKPVDIQGYYRPN
LELVTQAMRPSATFNAALATLSA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacgcccaagatcctgtacacgctcaccgatgaagccccgtacctggcgacg
cagtcactgctgccgatcgtcgccgcgttcgccggtaccgccggcatcgccgtggaaacc
cgcgacatctcgctggccggccgcctgatctcgcagttccccgaatacctgcgcgaggac
cagcgcatcgccgacgacctggccgaactgggccagctggcgaccacgccggacgccaac
atcatcaagctgcccaacatcagcgcctcggtgccgcagctcaaggccgcgatcaaggaa
ctgcagcagcaaggctacgcgctgccggactacgtggacgagcccaaggacgacaagcag
aaggaggccaaggcacgctacgacaaggtcaagggcagcgcggtcaacccggtgctgcgc
gagggcaattccgaccgccgcgcgccggcctcggtgaagcactacgcacgcaagcatccg
catcgcatgggcgcatggagcgccgagtccaagtcgcacgtggcgcacatggacgccggc
gatttctacggcagcgagcgttcggcgctgatcgaacaggccggtagcgtgaagatcgaa
ctggtcggcaaggacggcacggtctcggtgctgaaggagaagaccgcagtgcaggccggc
gagatcatcgacgcggcggtgatgagcaagcgcgcgctggccagcttcgtgcaggcgcag
atcgccgatgccaggcagcagggcgtgctgttctcgctgcacctgaaggcgaccatgatg
aaggtctccgatccgatcatgttcggcgtggtggtcggcgcgttctaccaggatgtgctg
gacaagcatgccgacaccctgaagcaggtcggcttcgatccgaacaacggtatcggcgac
ctgtacgcgcgcatcgccacgctgcccgaggcgcagcgcgcgcagatcgaggccgatctg
caggccgtgtacgcgcagcgtccggcgctggcgatggtcaattcggacaagggcatcacc
aacctgcacgtgcccagcgacgtgatcgtcgatgcgtcgatgccggcgatgatccgcgac
tcgggcaagatgtggaatgccgagggcaagctgcaggacaccaaggcgctgattccggac
cgctgctacgccggcgtgtaccaggcggtgatcgaggactgcaagcggcatggcgcgttc
gatccggcgacgatgggcagcgtgcccaacgtcggcctgatggcgcagaaggccgaggaa
tacggctcgcacgacaagaccttccagatcgccagcgacggcgtcgtgcgcgtcaccgat
gccggcggcaaggtgctgctggagcatgcggtggaagcgggcgacatctggcgcatgtgc
cagaccaaggacgcgccgatccaggactgggtcaagctggcggtcgagcgcgcgcgcctg
agcgccaccccggcggtgttctggctggatccgcagcgcgcgcacgatgcgctgatgatc
cagaaggtggagcgctacctgcaggatcacgacacccagggcctggacatccgcatcctg
acgccggtggaggccaccgcgttctcgctcgagcgcatccgcaagggccaggacaccatc
tcggtcaccggcaacgtactgcgcgactacctcaccgacctgttcccgatcatggagctg
ggcaccagcgccaagatgctgtcgatcgtgccgctgatggccggcggcggcctgttcgag
accggtgccggcggctcggcgcccaagcacgtgcagcagttcgtggaggagaactacctg
cgctgggattcgctgggcgagttcctggccctggccgcgtcgctggagcatctgggccag
cgcgaagacagcgccagcatcggcgtgttggccaggaccctggaccaggccaacggcacg
ttcctggacaacgacaagtcgccttcgcgcaaggtcggcgagctcgacaaccgcggcagc
catttctacctggcgctgtactgggcgcgggcgctggccacgcagaacgaggacgccgca
ttgcaggcgcgcttcgcgccgctggccaagcagctgaccgagcacgaggccacgatcgtc
gccgagctcaacggcgtgcaaggcaagccggtcgacatccagggctactaccgtccgaat
ctggagcttgtcacccaggcgatgcggccgagcgccacgttcaacgccgcgctggcgacg
ctgtcggcctga
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