Xanthomonas medicagonis: AB3X07_04050
Help
Entry
AB3X07_04050 CDS
T10867
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
xmd Xanthomonas medicagonis
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xmd03000
]
AB3X07_04050
Transcription factors [BR:
xmd03000
]
Prokaryotic type
Helix-turn-helix
Other families
AB3X07_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_30
AAA_5
HTH_23
AAA_2
HTH_7
HTH_28
HTH_17
HTH_50
HTH_20
MCM
HTH_22
PAS_9
HTH_AraC
AAA
PAS_8
Mga
Motif
Other DBs
NCBI-ProteinID:
XEB10353
LinkDB
All DBs
Position
complement(937301..939280)
Genome browser
AA seq
659 aa
AA seq
DB search
MSELTVANLPQAAAAAPTAAEAESALLARMRRFRQIEPLPPVLARSWQRCLDEYGLNPDA
TPSPMVHDGSGLRERQQRLEHLLRLAKVEMENLYEQIAGGGYAVVVADAEATVLHSVQDP
ALLREFRQTGLFCGASWAERYQGTNGIGTCAVERSALGVHRGEHYLARHLPLSCSGAPIL
DPHGELLAVLDASTPDARDTKLVQRHTSALVRMSAAQIARSYFLEQYRHAWILRFHSRPE
FAGLLHEALMAIGDDGCVLAVNEAALEQLGKGQRGLLVGRDISQIMQLDFDTVEQRARND
ASTLWSIRCACHGRRFFALAQPPRHAADARPRNAAGDSEAAYAREHVGSDPRMRHNLDNA
LKLAAHRVSILLCGATGTGKEEFAKAVHRGSPWSARPFVAVNCAAIPEALIESELFGYAR
GAFTDAAREGRHGKLLQASGGTLFLDEIGDMPLPLQTRLLRVLEEQSVTPLGSDRAMPLE
LHVISASHRDLAQMVAAGEFREDLYYRLNGVVLHLPPLRERSDKAELIRTLLREESGERA
VRISEDALHKLLSYAWPGNLRQLRNVLRTAAVLCADGVIRISNLPQEIVDADSGPCLVNG
DAVAADDMPGRAALDSAERRVLQQQLERHRWNVSRTADALGISRNTLYRKLRKHGLATM
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggagttgactgtagccaacctcccgcaggccgcggccgcggcgccaaccgccgcc
gaggccgagtccgccttgctggcgcggatgcgccggttccgccagatcgaaccgctgccg
ccggtgctggcgcgctcctggcagcgctgcctggacgagtacgggctgaatccggacgcc
acgccctcgccgatggtgcacgacggcagcgggctgcgcgaacgccagcagcggctggag
cacctgctgcgcctggccaaggtggagatggagaacctctacgagcagatcgccggcggc
ggctacgcggtggtggtggccgacgccgaggcgaccgtgctgcacagcgtgcaggacccg
gcgctgctgcgcgagttccgccagaccggactgttctgcggcgccagctgggccgaacgc
taccagggcaccaacggcatcggcacctgcgcggtggaacgcagcgcgctcggcgtgcac
cgcggcgaacactacctggcccggcatctgccgctgtcgtgcagcggcgcgccgatcctg
gacccgcacggcgagttgctggcggtgctggacgcttccacgccggatgcgcgcgacacc
aagctggtgcagcgccataccagcgcgctggtgcgcatgtcggcggcgcagatcgcgcgg
tcgtatttcctggaacagtaccggcacgcgtggatcctgcgcttccacagccgcccggaa
ttcgccggcctgctgcacgaggcgctgatggcgatcggcgacgacggctgcgtgctggcg
gtcaacgaagcggcgctggagcagctcggcaagggccagcgcggcctgctggtcggccgc
gacatctcgcagatcatgcaactggacttcgacaccgtggagcagcgcgcgcgcaacgac
gccagcacgctgtggtcgatccgctgcgcctgccacgggcgccgcttcttcgccctggcg
caaccgccgcggcatgccgccgacgcgcgtccgcgcaacgccgccggcgacagcgaggcc
gcctacgcgcgcgagcatgtcggctcggacccgcgcatgcgccacaacctggacaacgcc
ctgaagctggccgcgcaccgcgtctcgatcctgctgtgcggcgccaccggcaccggcaag
gaggaattcgccaaggcggtgcaccgcggctcgccgtggtcggcgcggccgttcgtggcg
gtgaactgcgcggcgatcccggaagcgctgatcgaaagcgaactgttcggctacgcgcgc
ggcgccttcaccgatgccgcgcgcgaagggcgccacggcaagctgctgcaggccagtggc
ggcaccctgttcctggacgagatcggcgacatgccgctgccgttgcagacgcgcctgctg
cgcgtgctggaggaacagagcgtgaccccgctaggcagcgatcgggcgatgccgctggaa
ctgcacgtgatcagcgccagccatcgcgacctggcgcagatggtggcagccggcgaattc
cgcgaggacctgtactaccgcctcaacggcgtggtgctgcatctgccgccgctgcgcgag
cgcagcgacaaggccgaactgatccgcaccctgctgcgcgaggagagcggcgagcgcgcc
gtgcggatcagcgaggacgccctgcacaagctgctcagctacgcctggccgggcaacctg
cggcagttgcgcaacgtgctgcgcaccgccgcggtgctgtgcgccgacggcgtcatccgc
atctccaacctgccgcaggagatcgtcgatgccgacagcgggccgtgcctggtcaacggc
gacgcggtcgccgccgacgacatgcccggccgcgccgccctggacagcgccgagcgccgc
gtgctgcagcagcaactggaacggcaccgctggaacgtcagccgcaccgccgacgcgctc
ggcatcagccgcaacaccctgtaccgcaagctgcgcaagcacggtctggcgacgatgtag
DBGET
integrated database retrieval system
