Xanthomonas medicagonis: AB3X07_04075
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Entry
AB3X07_04075 CDS
T10867
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd00550
Peptidoglycan biosynthesis
xmd01100
Metabolic pathways
xmd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB3X07_04075 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3X07_04075 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xmd01011
]
AB3X07_04075 (mrdA)
Enzymes [BR:
xmd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AB3X07_04075 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
xmd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AB3X07_04075 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
XEB10358
LinkDB
All DBs
Position
943623..945683
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AA seq
686 aa
AA seq
DB search
MALHPRRAQKNPHAEAEQFRRRAALGFLGVLLALVGLGGWYFKLQVLDHDIYATRSDANR
IKPRPVVPGRGMIYDRNGRLLAENVPAFRLDVTPDKVDDMDALLAELGKVIALSPEDIER
FQAARKASRSFRPITLKLRVSEEERARFAVDRWRFPGVELEPYLTRHYPYGDLFAHIIGY
VGRIDEKDLETLGEGNAALTHIGKSGLERYYEEELRGKVGYEQVETNVQGRAIRTVGRVP
AQSGADLRLSIDADLQRAMVAAFGDYQGSAIAIDPRTGEILAMVSLPSYDPNLFVNGISH
ADFQVLNSDPSRPQFNRLVLGGVAPGSTIKPFMGLAGLDSGTRRPEDKILSTGMFYLPGV
SRGWGDSHRGGHGWTDLRKSISQSVNTYYYKLAIDMGIGKVDQYMTRYGFGMPTGIDLVG
ESGGIVPSPAYKAKSRKEAWYPGDTVNIAIGQGDWKVTPLQLVRAVAGIADGQLRTPHLV
MAQRGAFDQPWTPVPLAPSKPISDNPGNLQAVREGMMDTMRPGGSGHAIAVSAPYQMAGK
TGTAQVVSRKGIAAVDPRSLPMHLRHRSLFEGFAPAEQPTIALAIAVEGGGYGASTAAPI
ARKIFDAWLLGRLPPGVEPLDSLRGATAFGSRLYYAEDPGSRAAADAVALAAGERPVLVG
PVAVDAASAPPADAPPPIPDEIPDER
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcatccgcgccgcgcgcagaagaacccgcatgccgaggccgagcagttccgg
cgccgcgccgcgctgggcttcctcggcgtgctgctcgcgctggtcggcctgggcggctgg
tacttcaagctgcaggtgctggaccacgacatctacgccacgcgctcggacgccaaccgc
atcaagccgcggccggtggtgcccgggcgcggcatgatctacgaccgcaacgggcgcctg
ctggccgagaacgtgcccgcgttccggctcgacgtgaccccggacaaggtcgacgacatg
gacgcgctgctggccgaactgggcaaggtcatcgcgctgtcgccggaggacatcgaacgc
ttccaggccgcgcgcaaggccagccgcagcttccgcccgatcacgctgaagctgcgcgtc
agcgaggaggagcgggcgcgcttcgcggtggaccgctggcgtttcccgggcgtggagctg
gagccgtacctgacccgccactacccctacggcgacctgttcgcgcacatcatcggctac
gtcggccgcatcgacgagaaggacctggagacgctgggcgagggcaatgccgcgctgacc
cacatcggcaagtccgggctggagcgctattacgaggaggagctgcgcggcaaggtcggc
tacgagcaggtcgagaccaacgtgcagggccgcgcgatccgcaccgtcggccgggtgccg
gcgcagtccggcgccgacctgcgcctgtccatcgacgccgacctgcagcgcgccatggtc
gccgcgttcggcgactaccagggctcggccatcgccatcgatccgcgcaccggcgaaatc
ctggccatggtcagcctgccgtcctacgaccccaacctgttcgtcaacggcatctcccac
gccgatttccaggtgctcaacagcgacccgtcgcggccgcagttcaaccgcctggtgctg
ggcggcgtggcgcccggctccaccatcaagccgttcatgggcctggccggcctggacagc
ggcacccgccgcccggaggacaagatcctctccaccggcatgttctacctgcccggggtc
agccgcggctggggcgactcgcaccgcggcggccacggctggaccgacctgcgcaagtcg
atctcgcaatcggtcaatacgtactactacaagctcgccatcgacatgggcatcggcaag
gtcgaccagtacatgactcgctacggcttcggcatgcccaccggtatcgacctggtcggc
gagagcggcggcatcgtgccgtcgccggcctacaaggccaagagccgcaaggaagcgtgg
taccccggcgatacggtcaacatcgccatcggccagggcgactggaaggtgacgccgctg
caactggtgcgcgcggtggcgggcatcgccgacggccaactgcgcacgccgcatctggtg
atggcgcagcgcggtgcgttcgaccagccgtggacgccggtgccgctggcgccgagcaag
ccgatcagcgacaaccccggcaatctgcaggcggtgcgcgaaggcatgatggacaccatg
cgcccgggcggcagcgggcatgcgatcgcggtcagcgcgccgtaccagatggccggcaag
accggcaccgcgcaggtggtcagccgcaagggcatcgccgcggtggatccgcgcagcctg
ccgatgcacctgcgccaccgctcgttgttcgagggcttcgccccggccgagcagccgacc
atcgccctggcgatcgcggtggaaggcggcggctacggcgccagcaccgccgcgccgatc
gcgcgcaagatcttcgatgcctggctgctcggccggttgccgccgggcgtggagccgctg
gacagcctgcgcggcgccaccgcgttcggcagccggctgtactacgccgaggatccgggc
tcgcgcgccgcggccgacgcggtcgcgctggccgccggcgagcgcccggtgctggtcggg
ccggtcgcggtggatgcggccagcgcgccgccagcggatgcgccgccgccgatccccgac
gagatcccggacgaacgatga
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