Xanthomonas medicagonis: AB3X07_06135
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Entry
AB3X07_06135 CDS
T10867
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xmd Xanthomonas medicagonis
Pathway
xmd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB3X07_06135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xmd02022
]
AB3X07_06135
02035 Bacterial motility proteins [BR:
xmd02035
]
AB3X07_06135
Two-component system [BR:
xmd02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
AB3X07_06135
Bacterial motility proteins [BR:
xmd02035
]
Pilus system
Twitching motility proteins
AB3X07_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_19
HTH_30
Motif
Other DBs
NCBI-ProteinID:
XEB10745
LinkDB
All DBs
Position
complement(1434863..1436251)
Genome browser
AA seq
462 aa
AA seq
DB search
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIAKHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDIHVLRGLVKHAL
ELNNSERPAPPAPPPEQASRLLGASTAMDALRATIAKVARSQAPVYILGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHRKGSFTGAHADQAGLFQAAHGGTLFLD
EVAELPLPMQVKLLRAIQEKSVRPVGASVEVPTDVRILSATHKDLADLVAEGRFRHDLYY
RINVIELRVPPLRERGGDLPQLAAAILARLAKSHGRITPLLSPSALDALNRYPFPGNVRE
LENILERALAMAEDDQIGAADLHLPQPGNSARAAAEAAPALPPGVVDIDPTSSALPSYIE
QLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgaagcgccctggtcgtcgacgacgaacgcgatatccgcgagttgctg
gtgctgaccttgggccggatggggctgcgcatcagcaccgcggccaacctggcagaggcc
cgcgaactgctggccagcaatccctacgacctgtgcatcaccgacatgcgcctgcccgac
ggcaacggcatcgaactggtcagcgaaatcgccaagcactacccgcgcaccccggtggcg
atgatcaccgcgttcggcagcatggacctggcggtggaagcgctgaaggccggcgccttc
gacttcgtcagcaagccggtggacatccacgtgctgcgcggcctggtcaagcacgcgctg
gaactcaacaacagcgaacgccccgcgccgccggcgccgccgccggagcaggccagccgc
ctgctcggcgcctcgaccgcgatggacgcactgcgcgccaccatcgccaaggtcgcgcgc
agccaggcgccggtctacatcctgggcgagtccggcgtgggcaaggaactggtcgcgcgc
accatccacgaacagggcgcgcgcgcggccgggccgttcgtgccggtcaactgcggcgcg
atccccgccgaactgatggaaagcgaattcttcggccaccgcaagggcagcttcaccggc
gcccacgccgaccaggccggcctgttccaggccgcgcacggcggcaccctgtttctggac
gaggtggccgaactgccgctgccgatgcaggtcaagctgctgcgcgcgatccaggagaaa
tcggtgcgcccggtcggcgcctcggtcgaagttccgaccgacgtgcgcatcctttcggct
acccacaaggacctggccgacctggtcgccgagggccgcttccgccacgacctgtactac
cgcatcaacgtcatcgaactgcgcgtgccgccgctgcgcgagcgcggcggcgacctgccg
caactggccgcggcgatcctggcgcggctggccaagagccacggccggatcaccccgctg
ctgtcgccatcggcgctggacgcattgaaccgctaccccttccccggcaacgtgcgcgaa
ctggagaacatcctcgaacgcgccctggcgatggccgaggacgaccagatcggcgccgcc
gacctgcacctgccgcagcccggcaacagcgcccgcgccgcggccgaagccgccccggcg
ctaccgcccggcgtggtcgacatcgacccgacctcctccgccctgccctcctacatcgag
cagctcgagcgcgccgcgatccagaaggcgctggaggagaatcgctggaacaagacccgc
accgccgcccagctcggcatcaccttccgcgcgctgcgctacaagctcaagaagttgggg
atggagtag
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