Xanthomonas medicagonis: AB3X07_06585
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Entry
AB3X07_06585 CDS
T10867
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3X07_06585 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xmd03019
]
AB3X07_06585 (recQ)
03400 DNA repair and recombination proteins [BR:
xmd03400
]
AB3X07_06585 (recQ)
Enzymes [BR:
xmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3X07_06585 (recQ)
Messenger RNA biogenesis [BR:
xmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3X07_06585 (recQ)
DNA repair and recombination proteins [BR:
xmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB3X07_06585 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
XEB10824
LinkDB
All DBs
Position
complement(1544644..1546452)
Genome browser
AA seq
602 aa
AA seq
DB search
MQSSAHSVLGRVFGYDQFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQIPSLLRDGTG
IVISPLIALMQDQVEALRQLGVRAEYLNSTLDAETAQRVERELLAGDLDLLYVAPERLLT
PRFLSLIERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQTPRIALTATADPPT
QREIAERLDLTQARHFVSSFDRPNIRYTVVQKDNSKRQLLDFLRAHRGSAGIVYCLSRRK
VEETADFLAREGLNALPYHAGLPAEVRAANQRRFLREDGIVMCATIAFGMGIDKPDVRFV
AHTDLPKSLEGYYQETGRAGRDGEPAEAWLCYGLGDVVLLKQMIEQGEAGEDRKRVERRK
LDQLLGYCESMQCRRQVLLASFGETYPQPCGNCDNCLTPAAAWDATLAVQKALSCVYRSG
QRFGVGHLIDILRGSDSEKVKQFGHDQLSTYGIGKDLDARAWRGVFRQLVATGLLEVDSD
AYGGLRLTDASRQVLKGERQIMMRREAPSRGRDRGDRSGSPRTGVPVQPQDLTLFNALRD
LRAGLAKEQNVPAFVIFHDSTLRNIAEQRPTSLDELAHVGGIGGTKLARYGQQLIDIVQQ
QG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcctccgcccactccgtgctcggccgcgtgttcggctacgaccagttccgcggt
ccgcagcaggacatcgtcgaacacgtcgccgccggccacgacgcgctggtgctgatgccc
accggcggcggcaagtcgctgtgctaccagattccctcgctgctgcgcgacggcaccggc
atcgtcatctcgccgctgatcgcgctgatgcaggaccaggtcgaggcgctgcgccagctc
ggcgtgcgcgcagagtatctcaactccaccctggacgcggagaccgcgcagcgggtcgag
cgcgagttgctggccggcgacctggacctgctgtacgtggcccccgagcgcctgctcacc
ccgcgcttcctgtcgctgatcgagcgtagccgcatcgccctgttcgcgatcgacgaggcc
cactgcgtctcgcagtggggccacgacttccggcccgagtaccggcagctcacggtgctg
cacgagcgctggccgcagaccccgcgcatcgccctgaccgccaccgccgacccgccgacc
cagcgcgagatcgccgagcgcctggacctgacccaggcgcgccacttcgtcagttccttc
gaccggcccaacatccgctacaccgtggtgcagaaggacaacagcaagcgccaactgctg
gacttcctgcgcgcgcaccgcggcagcgccggcatcgtctattgcctgtcgcggcgcaag
gtcgaggaaaccgccgacttcctggcccgggaagggctcaacgccctgccctaccatgcc
ggcctgccggccgaggtccgcgccgccaaccagcgccgcttcctgcgcgaggacggcatc
gtgatgtgcgccaccatcgccttcggcatgggcatcgacaagccggacgtgcgcttcgtc
gcccacaccgacctgcccaagtcgctggagggctactaccaggaaaccggccgcgccggc
cgcgacggcgaacccgccgaggcctggctgtgctacggcctgggcgacgtggtgctgctc
aagcagatgatcgaacagggcgaggccggcgaggaccgcaagcgggtggagcggcgcaag
ctcgaccagttgctgggctactgcgagtcgatgcaatgccggcgccaggtgctgctggcc
agcttcggcgaaacctacccgcagccctgcggcaattgcgacaactgcctgaccccggcc
gcggcctgggacgccaccttggcggtgcagaaggcgctgagctgcgtctaccgcagcggc
cagcgcttcggcgtcggccacctgatcgacatcctgcgcggcagcgacagcgagaaggtc
aagcagttcggccacgaccagctcagcacctacggcatcggcaaggacctggacgcgcgc
gcctggcgcggcgtgttccgccagttggtcgccaccggcctgctggaggtggacagcgac
gcttacggcgggctgcgcctgaccgacgccagccgccaggtgctcaagggcgagcgccag
atcatgatgcgccgcgaggcgcccagccgcggccgcgaccgtggcgaccgcagcggcagc
ccgcgcaccggggtcccggtgcagccgcaggacctgaccctgttcaacgccttgcgcgac
ctgcgcgccggcctggccaaggaacagaacgtgccggccttcgtgatcttccacgacagc
accctgcgcaacatcgccgagcagcgccccaccagcctggacgaactggcccacgtcggc
ggcatcggcggcaccaagctggcacgctacggccagcaactgatcgatatcgtgcagcag
caaggttag
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integrated database retrieval system
