Xanthomonas medicagonis: AB3X07_06670
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Entry
AB3X07_06670 CDS
T10867
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd00550
Peptidoglycan biosynthesis
xmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB3X07_06670 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xmd01003
]
AB3X07_06670 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xmd01011
]
AB3X07_06670 (mrcB)
Enzymes [BR:
xmd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AB3X07_06670 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AB3X07_06670 (mrcB)
Glycosyltransferases [BR:
xmd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AB3X07_06670 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xmd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AB3X07_06670 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
XEB10838
LinkDB
All DBs
Position
1567901..1570354
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AA seq
817 aa
AA seq
DB search
MPRRYDDNDTDDQDTDDLDSGASPWRRRLLTWGLAATALGLGFLIPYTVYLNKQVTQRFG
ELRWQLPTRVYARPLTLAPDTAMDAQTLKTELDAASYREDAGAQRPGSYQQEGSRFVIAS
RGYIDVDGRVAPKRVEVSLSGGRVAALRDAQTRKTLNAVRLDPARIATLYGQKQEERRLV
RVDEVPELLVTGLQAVEDRDFNYHHGIDLSGMVRAAWVMVRSGGKSRQGASTLTQQLARS
GLLGIGKEQTLTRKFNEILYALIMEARYDKRTILEAYLNQVYLGQRGSQAIHGVASGAEF
WFGRELDALPPEQVALLIGLVKGPSYYDPRRYPERALDRRNFVLGKLRESELIDEPTYRQ
ALAAPLGVPANPGLVAANRFPAYVDLVRRQLARDYPESALQGAGLSVLTGMSPSAQAYAE
GAVTRTIKSLETNKKRPPLQAGLVLTDTHNGDVLAVVGSRDVAQPGFNRAIEAQRQVGSL
LKPFVYLLALAQPDRYSLASWVDDSPVTVQLGRGKRWTPGNSDNRSHGTVRLIDALAHSY
NQATVRVGMQVGPDRVAQLIKVLAGLEAETNPSLILGATDQSPYAMTQLYQFLASGGEIQ
PLHAVRGVLDPQGKLLKRYDKTPAPAQEGDSVAANLVGLALQQVVSNGTARQLLGDGLGK
LSPAGKTGTSNDGVDSWYAGYTGDHLAVIWIGNDQNKQTGLYGATGAMRVWSGIFSRLPS
SPLKVQGKGIDWQWMDPAGSNSTDASCPGARQFPFVVGFAPAYAPCAPPQALPEDGQPPA
EGSDGEQRQGGGWRSWFGLDKKKDPPPADAATTPPAH
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgacgctacgacgacaacgacaccgacgatcaggacaccgacgatctcgacagc
ggcgcctcgccctggcgccggcgcctgctcacctggggcctggccgcgaccgcgctgggg
ctgggcttcctgatcccgtacacggtctatctgaacaagcaggtgacgcagcgcttcggc
gaactgcgctggcagctcccgacccgggtctacgcccgcccgctgacgctggcgccggac
acggcgatggacgcgcagaccctgaagaccgagctggacgcggccagctaccgcgaggac
gccggcgcgcagcgccccggcagctaccagcaggagggcagccgcttcgtcatcgccagc
cgcggctacatcgacgtcgacggccgggtcgcgcccaagcgcgtggaggtgagcctgtcc
ggcgggcgcgtggcggcgctgcgcgacgcgcagacgcgcaagaccttgaacgcggtgcgg
ctggacccggcgcgcatcgccaccctgtacgggcagaagcaggaagaacggcggctggtg
cgggtggacgaagtgcccgaactgctggtcaccgggctgcaggcggtggaagaccgcgat
ttcaactaccaccacggcatcgacctcagcggcatggtccgcgcggcctgggtgatggtg
cgctcgggcggcaagagccggcagggcgccagcaccctgacccagcagctggcgcgcagc
ggcctgctcggcatcggcaaggagcagacgctcacccgcaagttcaacgagatcctgtac
gcgctgatcatggaggcgcgctacgacaagcgcaccatcctggaggcctatctgaaccag
gtgtacctgggccagcgcggcagccaggcgatccatggcgtggcctcgggcgcggagttc
tggttcgggcgcgaactcgatgcgctgccgccggagcaggtggcgctgttgatcggcctg
gtcaaggggccgtcgtactacgacccgcgccgctatcccgagcgcgcgctggaccggcgc
aacttcgtgctcggcaagctgcgcgagagcgaactgatcgacgagcccacctaccgtcag
gcgctggccgcgccgctgggcgtgccggccaatccgggcctggtcgcggccaaccgcttc
cccgcgtacgtggacctagtgcgccgccagctggcgcgcgactacccggaaagcgcgctg
cagggcgccgggctgagcgtgctgaccggcatgtcgccgtcggcgcaggcctacgccgag
ggcgcggtgacgcgcaccatcaagtcgctggagaccaacaagaagcggccgccgctgcag
gccgggttggtgctgaccgacacccacaacggcgacgtgctggcggtggtcggcagccgc
gacgtggcgcagcccggcttcaaccgcgccatcgaggcgcagcggcaggtgggctcgctg
ctcaagccgttcgtgtacctgctggcgctggcgcagccggaccgctactcgctggccagt
tgggtcgacgactcgccggtgacggtgcagttgggccgcggcaagcgctggaccccgggc
aattccgacaaccgcagccacggcacggtgcgcctgatcgatgcgctggcgcattcctac
aaccaggccacggtgcgggtcggcatgcaggtggggccggaccgggtggcgcaactgatc
aaggtgctggccgggctcgaggccgagaccaacccgtcgctgatcctgggcgcgaccgac
cagagcccgtacgcgatgacccagctataccagttcctcgcctccggcggcgagatccag
ccgctgcacgcggtgcgcggcgtgctcgatccgcagggcaagctgctcaagcgctacgac
aagaccccggcgccggcgcaggaaggcgattcggtggcggccaacctggtcgggctggcg
ctgcagcaggtggtcagcaacggcaccgcgcggcagctgctcggcgacggcctgggcaag
ctgtcgccggccggcaagaccggcaccagcaacgacggcgtggacagttggtacgccggc
tataccggcgaccacctggcggtgatctggatcggcaacgaccagaacaagcagaccggc
ctgtacggcgccaccggcgcgatgcgggtgtggtcgggcatcttctcgcgcctgccgagt
tcgccgctgaaggtgcagggcaagggcatcgactggcagtggatggacccggccggcagc
aacagcaccgatgccagctgtcccggcgcgcgccagttcccgttcgtggtcggcttcgcc
ccggcgtatgcgccgtgcgcgccgccgcaggccttgcccgaggacggccagccgccggcc
gaaggcagcgacggcgagcagcgccaggggggcggctggcgcagctggttcggcctggac
aagaagaaggacccgccgcccgccgatgcggcgaccacaccgccagcgcactga
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