Xanthomonas medicagonis: AB3X07_10375
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Entry
AB3X07_10375 CDS
T10867
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
xmd Xanthomonas medicagonis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
RHS
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
XEB11529
LinkDB
All DBs
Position
complement(2428965..2433842)
Genome browser
AA seq
1625 aa
AA seq
DB search
MPKAARLHDPIAHTYAREGHAAGAAIAAALEFGTAVAVTELVASAIAGGTIICPGLGTLA
GIAVGIGIVLGSFAIAHIASLAGDFIQSFGEAFGRTLTSDCGKLEATGSSTVFINGKPAI
RTGLDVGQCAKHSPPTSLVIYGSENVFIDSYRAAREGDCLDCEAKISKGSDDVFIGGESV
PIARFRDQEIPASDRELASQARFWGGIIGGATGALKAGLKCFGMAVLTGVVGAKVMGEIL
PSFDGGHSAVSGWGKSAGTAVGNFLQGKPVHVVTGAKVLLGDDDTDFSLPGALPIVWRRT
YASCDGRTGALGTGWSLPFSVELVFEGGKAHFIDESGRDVPFDDLPPGGQMFSVPEGVQL
SRGENGAYFIGMPALGWIYCFGQRAGSSDGERLGLQQWADFNGNTIDFHRDADGVVRHVT
DSAGHRLALRYAQAGGLRLVRVDLTAGGPAGTLVEYRYDAHGQLAQVIDRLGRCVRRFTW
EGSTLVAQTFASGLVARYRWDRPAPEGRVVQHWLEDAAPGMPATAWTFEYDLPGERPGDR
RTRVTDHIGRVQLFDHDADQNVTRIEDPLGQVQRMEWNELWQLLAWTRADGSRFTFTYDR
LGNLTGATDPLGQTARLDWHERLQRVRAATAVDGTRWHYTYDDRGNRTEVLGPPQDPGSP
PHIPGSEGEARWRESTVHDPRGLPVVTIDANGGRQQWAWDERALLVRHTDCSGKTTRFEY
DANGFLSKHIDALGQTTHYVHDALGRLLSVTRADGTAARYSYDDADQLVSAGDSSHRLTH
YRYDIHGKLLALQRPDGSTVHLGYDAAHRLASLVSENGATYRFAYDTANRMVQELRPDGS
RRAFAHDALGRVVALREDPGEDDVIEHAIPGHAPAAPIQTAYERDAIGRLIEKRVQAVAR
APSPQDTIVQRFAYDRMNRLVRAQTLDDAGQSPVQAAEFGYSLLGDLVLDSARDADAGTH
TVLRHTHDPLGNRLATELPDGRVLRHLHYGSGHVHQISLDGVVVADIERDDLHREVLRTQ
GRWASRWAYDPLGRQRAQWTQSASLRVGGDWAQQMPDATTSPGLAVPTDGLRKQWDYDAA
GELVRTRHSRNGETRYRYDPAGHVLSATLQAAGAVGGVSPALQQALHEVFHYDPAGNRLD
APVPQGAEGSRGWVRHNRVKVLQDKRYDYDGFGRLVRKRIGAHTELHCRYDALHRMTHAS
VIRAGREGDPIRQVFRYRYDPLGRRIAKEDDFGETRFVWEGLRLLQESRGAQTSTYVYEP
VSHRPLARIDGAGPLEPEHPAAVLALAGHAPRSDPAEGKVRSIPVTNADASDAYHAVAGP
VGATARWMAELEARERGTRSAEQEPKPQVNSVPPTPDSSQASARIYYFHLQPNGLPEEMS
DRDGHLVWRAQYRVWGSAVTEEWQAFDAAGRPVDAPMAETGTRTQPGAAPLPQNLRMQGQ
YLDRETGLHYNTFRYYDPDIGAFTTPDPIGLAGGVNLHQYAFNPITWTDPLGWCRRGNAA
TKSHMDQVRDQFQAENPTYNHDRGGRNATTGIEQPETYLKPLSGNGRKGASYTDMTFEDG
QGRTVYIQTVDKGTVNGMSQREWNNAVRITQQDPNAVVITVPKGSLPAPGTLDASQMPTG
TVTRR
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggccgcccgactgcacgacccgatcgcccacacctatgcacgcgaggggcat
gcggcaggggccgcgattgcggccgcgctcgaattcggcacggccgtcgcggtcacggag
ctcgtcgcgagcgcgattgccggcggaacgatcatatgcccgggcctcggcacgctggcc
ggcattgccgtcggcatcggcattgtgctgggctctttcgccatcgcacatatcgcgagc
ctggctggcgatttcatccaatccttcggcgaagccttcgggcgaactctgacctccgat
tgcggcaagctcgaagcgaccggatcgagcacggtcttcatcaacggtaagccggcgatc
cggaccgggctggatgtgggccaatgcgccaagcacagcccgcccaccagcctggtgatc
tacggcagcgagaacgtcttcatcgacagctaccgcgccgcgcgagaaggcgactgcctg
gactgcgaggcgaagatcagcaagggctcagacgatgtcttcataggcggggaatcggtc
cccatcgcgcgttttcgggaccaggagataccggcctccgaccgagaactcgccagccag
gcccgcttctgggggggcatcatcggcggcgccaccggcgcgctcaaggccggtctcaaa
tgcttcgggatggccgtgctcaccggtgtcgtgggcgcgaaggtgatgggagagatcctg
ccgtcgttcgacggcgggcattccgccgtgagcggctggggcaaaagcgcgggcacggcc
gtcggcaacttcctgcaaggcaagcctgtgcatgtggtgaccggcgccaaggtgctgctg
ggcgatgacgacaccgacttcagcctgcccggagcgctgcccatcgtctggcgccgcacg
tatgcgtcctgcgacgggcgcacgggcgcgctgggcacgggctggagcctgcctttcagc
gtggagctggtcttcgagggcggcaaggcgcacttcatcgacgagtccggccgcgacgtc
cccttcgacgacctgccgcccggcggccagatgttcagcgtgccggaaggtgtgcaactg
agccgcggggagaacggcgcctacttcattggcatgcctgcgctgggatggatctactgc
ttcggccagcgcgccggcagcagcgatggcgaacgcctggggttgcagcaatgggcggat
ttcaacggcaataccatcgacttccaccgcgatgccgacggtgtggtgcggcatgtgacc
gacagcgcgggccaccggctcgcgctgcgctatgcgcaggccggcgggctgcgcctcgtg
cgcgtggacctcacggcgggcggcccggccggcacgctggtcgaataccgctacgacgcc
catggccagctcgcccaggtcatcgaccgcctggggcgctgcgtgcggcgcttcacctgg
gagggctccacccttgtcgcgcagaccttcgcgagcgggctggtggcccgctaccggtgg
gaccggcccgcgcccgaaggccgcgtggtgcagcactggctggaggacgctgccccgggc
atgcccgccaccgcctggaccttcgaatacgacctgcccggcgaacggcccggcgatcgg
cgcacgcgcgtcacggaccacatcggacgggtgcagctcttcgaccacgatgcggaccag
aacgtcacgcgcatcgaggatccgctggggcaggtgcagcgcatggagtggaacgagctg
tggcaactgctggcctggacgcgtgcggacggcagccggttcaccttcacctacgaccgc
ctgggcaacctgaccggtgccaccgacccgctggggcagaccgcccggctggactggcac
gaacgcctgcagcgcgtgcgcgcggccaccgccgtggacggtacccgctggcactacacc
tacgacgaccgcgggaaccgcacggaggtgctcgggccgccgcaggatccgggttcgccc
ccgcatatcccgggcagtgagggcgaagcgcgctggcgcgaatccacggtgcacgacccc
cgcggcttgccggtggtcaccatcgacgcgaacggtggacgccagcaatgggcctgggac
gaacgcgccctgctggtgcgccacaccgattgctcgggcaagaccacgcgcttcgagtac
gacgccaatggattcctgagcaagcacatcgatgcgctggggcagaccacgcattacgtg
catgacgcgctcgggcggctgctgagcgtgacgcgggcggacggaacagcggcaagatac
agctacgacgacgcggaccagctcgtgtcagccggcgattcgagccaccggctcacgcac
taccgctacgacatccacggcaagctgctggcgctgcagcggcccgacggcagcacggtc
cacctgggctacgacgcagcgcaccgcctcgcgagcctcgtcagcgagaacggcgccacc
taccgctttgcctacgacacggccaaccggatggtgcaggaattgcggccggacggtagc
cggcgggcattcgcgcacgatgcgctggggcgcgtggtagcactgcgggaagacccgggc
gaggacgacgtgatcgagcacgcgataccgggccacgcgccggccgcgccgatccagacc
gcctacgaacgcgatgccatcggccggctgatcgaaaagcgcgtgcaggccgtggcgcgc
gcaccgtctccgcaagacaccatcgtgcagcgcttcgcctacgacaggatgaaccggctg
gtgcgcgcgcaaacgctcgatgatgcaggccagtcgcccgtgcaggcggcggaattcggt
tacagcctgctgggagacctggtcctggactcggcgcgggacgccgacgcgggcacgcac
accgttctacgccacacgcacgacccgctgggcaaccgcctcgccaccgaactgccggac
gggcgcgtgctgcgccacctgcactacggcagcggccatgtccaccagatcagcctggac
ggcgtcgtggtggccgacatcgagcgcgacgacctgcaccgcgaggtgctgcgcacgcag
gggcgctgggcgagccgctgggcctacgatccgctgggccggcagcgggcgcagtggacc
caatcggcgagcctgcgtgtaggcggcgactgggctcaacagatgccggacgcgacgacc
tcgccgggattggcagtgcccacggacggcctgcgcaagcaatgggactacgacgccgcg
ggtgagttggtgcgcacgcgccacagccgcaatggggagacgcgctaccgctacgacccg
gcaggccatgtcctgtcggccacgctgcaggccgcgggcgctgtgggcggcgtgtctccg
gccctgcaacaggcgctgcacgaggtgttccactacgacccggccggcaaccggctggac
gcgcccgtgccgcagggcgccgagggcagccgtggatgggtgcggcacaaccgggtgaag
gtgctgcaggacaagcgctacgactatgacggcttcggccgcctggtgcgcaagcgcatc
ggcgcgcacaccgaactgcattgccgctacgacgcgctgcaccgcatgacccacgcctcc
gtcatccgcgccggccgcgagggcgaccccatccgccaggtcttccgctatcgctacgac
ccgctgggccggcgcatcgccaaggaggacgacttcggcgagacgcggttcgtgtgggaa
ggcctgcggctgctgcaggagagccgcggagcccaaaccagcacctacgtgtacgaaccc
gtcagccaccggccgctggcacgcatcgacggcgctgggccgctggagcccgagcatccg
gccgcggtgctggcgctggccgggcacgccccccgcagcgacccggcggagggcaaggtc
cgctccatccccgttaccaatgcggacgcgagcgatgcctaccatgcggtggctgggccg
gtaggcgcgacggcgcgctggatggccgagctggaagcgcgcgagcgtgggacgcggagc
gcggaacaggagccgaagccgcaggtaaattccgtgcctccgactcccgactcgtcgcag
gcctcggcgcgcatctactacttccaccttcagcccaacgggctgcccgaagagatgagc
gatcgcgacggccatctggtgtggcgggcgcaataccgcgtgtggggcagcgcggtcact
gaggaatggcaagcgttcgatgcagcaggtcgccccgtggatgcgccaatggcggagacc
ggcacccggacgcagccgggcgcggcgcccctgccgcagaacctgcgcatgcaggggcag
tacctggaccgggagacggggctgcattacaacaccttccgatactatgacccggacatt
ggcgccttcactacgcctgatccgatcggcttggcaggcggggtgaatctgcaccaatat
gcgttcaaccccataacttggaccgacccgcttggctggtgccgtagaggcaatgccgcg
accaaaagccatatggaccaggtgcgggatcagttccaagccgaaaaccctacgtataac
catgatcgaggtgggcgcaatgccacgacggggattgaacaaccagagacctatttgaaa
ccgttgagtggtaatgggcgtaaaggggcttcctataccgacatgacgttcgaggatggc
caagggcgtaccgtttacatccagacagtggataagggtaccgtgaacggtatgagccag
cgtgagtggaacaatgcagtacgcatcacccaacaggatccgaatgcagtcgtcataact
gttcccaagggaagcctccccgctccggggacgctggatgcatcccagatgcctacgggc
actgtaacgagaaggtga
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