Xanthomonas medicagonis: AB3X07_12670
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Entry
AB3X07_12670 CDS
T10867
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xmd Xanthomonas medicagonis
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xmd03016
]
AB3X07_12670 (truD)
Enzymes [BR:
xmd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AB3X07_12670 (truD)
Transfer RNA biogenesis [BR:
xmd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB3X07_12670 (truD)
Prokaryotic type
AB3X07_12670 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
XEB11832
LinkDB
All DBs
Position
complement(3009509..3010525)
Genome browser
AA seq
338 aa
AA seq
DB search
MRSVAEDFQVDELPAFAPTGEGEHLLLTVRKRGMNTAFAARRLAHWAGVAEMAIGYAGMK
DRHAVTTQRFSVHLPKRVAPALEALHSEELQVLEAHWHNRKLPRGALAGNGFVLVLREVR
GERTAIEAQLAQIAARGIPNWFGEQRFGRDGGNVGAALAMFGGRRVRREQRSLLLSAARS
ELFNRVLAARVAAGNWDSALEGEVWMLDGSRSVFGPEPWSQALAERLQRFDIHPSAPLWG
AGELRSAEAARALELAALDDAVALRLREGLEREGLKQERRATRLRAGALQWRWLDADATA
LELCFTLPPGSYATALLHELGEVADAGQGMQAEPAAQE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgtggccgaggactttcaggtcgacgaactgcccgcgttcgcgcccaccggc
gagggcgagcacctgttgctgacggtgcgcaagcgcggcatgaacaccgccttcgccgcg
cgccgcctggcgcactgggccggcgtggcggagatggcgatcggctatgcgggcatgaag
gaccggcatgcggtcaccacccagcgattctcggtgcatttgcccaagcgcgtggcgccg
gcgctggaagcgttgcacagcgaagaattgcaggtactggaagcgcactggcacaaccgc
aagctgccgcgcggcgctctggccggcaacggcttcgtgctggtgttgcgcgaggtgcgc
ggcgagcgcacggcgatcgaggcgcagttggcgcagatcgccgcgcgcggcatccccaac
tggttcggcgagcagcgcttcggccgcgatggcggcaatgtcggcgctgcgctggcgatg
ttcggcgggcgccgggtgcgccgcgagcagcgctcgctgctgctgtcggccgcgcgttcc
gaactgttcaaccgggtgctggccgcgcgcgtggccgccggcaactgggacagcgcgctg
gagggcgaggtgtggatgctcgacggcagccgcagcgtgttcggcccggagccatggtcg
caggcgcttgccgaacgcctgcagcgcttcgacatccatccgtccgcgccgttgtggggc
gccggcgaactgcgcagcgccgaggcggcacgcgcgctggaactggccgcgctggatgac
gcggtcgcgctgcgcctgcgcgagggtctggagcgcgaagggctgaagcaggaacggcgc
gccactcgcttgcgcgccggcgcgctgcaatggcgctggctggacgcggacgccaccgcg
ctggaactgtgcttcacgttgccgcccggcagctacgccaccgcattgctgcacgagttg
ggcgaggtcgccgatgcggggcagggcatgcaggccgagcccgcggcgcaggaatga
DBGET
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