Xanthomonas medicagonis: AB3X07_14460
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Entry
AB3X07_14460 CDS
T10867
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
xmd Xanthomonas medicagonis
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xmd02044
]
AB3X07_14460
02035 Bacterial motility proteins [BR:
xmd02035
]
AB3X07_14460
Secretion system [BR:
xmd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
AB3X07_14460
Bacterial motility proteins [BR:
xmd02035
]
Pilus system
Pilus assembly proteins
AB3X07_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PA14
Motif
Other DBs
NCBI-ProteinID:
XEB11860
LinkDB
All DBs
Position
complement(3474754..3479736)
Genome browser
AA seq
1660 aa
AA seq
DB search
MKIKHWILLGLLGVAAFIVGRAITAPGELNISQQPLFLRSSLPPLNMLVMGRDHKLYYEA
YNDASDLNEDGVLDVGYKPDTINYYGYYNSNVCYQSVEGTGGQLFRPVSQATGTNKKQCT
NLWSGDFLNYVTTSRMDALRKVLFGGYREVDSTSETILRAAYIPEDAHSWGKEYQSIARD
GYDISKYTPYAAPASGRYVLFAVTTLSDNGIPQMRVLNNTPFRIWNWVSIERPVAGDDCF
TASSTRVNCVNSSQAGWEVVPSVAYANPLEIITWKDSIGNPGDKTAMDNLFAADKNSNRC
GTGTVAAINTSGGNNNPFSGSNGCTQDNYHTRISGQINITQAGNYKFAVNGDDAVDVAID
GTVVASWYGGHGQNSGADSLNTHSGTVYLNAGLHSVVFRHEEGGGDDNWQLYWIPPANAN
ATAMTNYALRVEACSATAELREDNCKIYPSGAIKPTGILHDYGETDRMYFGLLTGSYAKN
ISGGVLRKNMGSFSDEINPSTGQYCLNGNCGNGRDVKGVVHTISTFRMLDFRYSDYTYGC
GWITTRPVNEGECWMWGNPVAEMMYETLRYFGGAKTPRSEFNYTSGVDESTLGLSKPAWK
PPYVASQDGGGGYPKCSQPTMTVLSDINPSYDYSVPGTHWGTMSSSGDPDSLQDLNVSAQ
VDKIWELEGGGSRSVFIGESNGVTDNAPTPKTVSNLSTVRGLSPEEPSKQGTFYSAGVAR
YGATKFVGGDKHMRTYSVALASPLPKFKFPVGDGSITLVPFAKSVAGSNISATSNFQPTN
QIVDFYVQKVANTDPRGRDHDANTNGGRPYAEFRINYEDVEQGADHDMDAFVLYTLAVNQ
TNQLVVSLSSEYAAGGISQYMGYVISGTTADGVYLEVKDQGGDNVAYRLNTPPGRAPGYC
NTQAPPNDCVGLPLNATRTFNVGNNVGASLLESPLWYAAKYGTDLNPDANNDGTPDNYFL
VTNPLYLKAQLTKTFDAIENQNGSSGTVSVSGARVSSSSYVVAPSYGNYNNGADWVGDLQ
KFPVLSNGLLGTVQWSAAAKMPTDAAGVAQRKIFTALSSVNSTNRSNVVREFTAANLVAT
PSGSAAADAAEIFNRLGYTTGDIINKFGGNVTPGQLVDYLRGDQTMEGTAKNTAPFRRRS
KILGDIVNSAPVIATKRANYGWATATGLASAARGSYAAYLTSKGQAAHEYIYAGFNDGML
HAFNDAGDETFAYVPNGVLGKTGFLADAGLDGGSGYTHRFYVDGQLTTADVYLGGHWKTV
VVGTAGAGGRAAFALDVTDPASFSADEVLWEINGQSDTELGYAMGKPVVVPLQNGKWVAL
IGNGYNSVNSDPVLFVVDIETGSVLAKLRPNDDDDVNVNGLGNLVTLDTDGNGLVDTVYG
GDLQGNVWKFDLSGDHASDWNVAYNGVPMFVAHDLHGARQPITGEFEVATGPGNGYMLYF
GTGRYFTVGDNSSAMGQQVQSLYGVWDSGTPVTGDRDAALVAQTITASTTGTRSVSRNAV
NYLQSRGWYLDLLTTNTAGVAQTTGERFFGRPLIQSGSVSFSAYQPEVASDCDPGGQNWL
YRLNLLTGAPAYGQVTLPDGTVVSGGSVGATATGSGAPSRGVAVTQPVASEPVYCDPADP
KCTGGGGPQQCKEVTLNPNKPENSLISQRSCGRQSWRQIK
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaacactggatactgttagggctgctgggcgtcgcggcattcatcgtgggg
cgcgcgatcaccgcgcccggggagttgaatatctcgcagcagccgctgttcctgcgcagt
tcgctgccgccgctgaacatgctggtgatggggcgcgaccacaagttgtactacgaagcc
tacaacgacgcgtccgatctgaacgaggatggggtgctggacgtcggctacaagccggac
accatcaattactacggctactacaactctaacgtctgctaccagtcggtggaagggacc
ggcgggcagttgttccgaccggtcagccaggcaaccggtaccaacaagaagcaatgcacg
aacctgtggagtggcgatttcctgaactacgtcaccacctcgcgcatggacgccctgcgc
aaggtcctgttcggcggctaccgcgaggtggacagcacgagcgagacgattctgcgtgcg
gcctacatccctgaggacgcgcacagttggggcaaggaatatcagagcatcgcccgcgac
gggtacgacatcagcaagtacacgccgtatgccgcgcctgccagcgggcgttacgtcctg
ttcgcggtgacgacgctgtccgacaacggcattccgcagatgcgggtgctcaacaatacg
ccgttccggatctggaactgggtgtcgatcgagcgcccggtcgccggcgacgactgcttc
accgcctccagtacccgggtcaattgcgtcaacagttcgcaggccggatgggaggtcgtg
ccgagcgtcgcctacgccaatccccttgagatcatcacctggaaggactcgatcggcaat
ccgggcgacaagacggcgatggacaacttgttcgccgccgataagaactccaatcgttgc
ggtaccggcacggtcgccgccatcaataccagcggaggcaacaacaatccgttttccggc
tccaatggctgcacgcaggacaattaccacacgcggatttccggacagatcaacatcacc
caggccggcaactacaagttcgcggtcaatggcgatgacgccgtggacgtggcgatcgac
ggcaccgtggtcgcgtcctggtatggcggtcatggacagaacagcggcgctgatagcctg
aatacccattccggaaccgtctatctcaacgcgggcctgcactcggtcgtattccgtcac
gaggaaggcggcggcgacgacaactggcagctgtactggattccgcccgccaatgccaat
gcgacggcgatgaccaattacgccttgcgcgtcgaggcatgctcggcgaccgccgaactg
cgcgaggacaactgcaagatctatcccagcggcgcgatcaagcccaccggcatcctgcac
gattacggcgaaaccgatcgcatgtacttcggcctgctcactggttcctatgccaagaac
atctccggcggcgtgctgcgcaagaacatgggcagtttctccgacgagatcaatccaagc
accggccagtattgtctgaacgggaattgcggcaatggccgcgacgtgaagggggtggtg
cataccatcagcaccttccgcatgctcgacttccgctacagcgactacacctacggatgc
ggctggatcaccacccgcccggtgaacgagggcgagtgctggatgtggggcaatccggtc
gccgagatgatgtacgagaccttgcgctacttcggtggcgcgaaaacgccacgcagcgag
ttcaactatacgtcgggcgtcgacgagtcgacgctcgggttgtccaagcccgcatggaag
ccgccctacgtggcctcgcaggatggcggtggcggctatccgaagtgctcgcagccgacg
atgacggtgttgagcgacatcaatccctcctacgattacagcgtgcccggcacccattgg
gggacgatgagttcgagcggcgatccagattcgctgcaggatctgaacgtgtcggcgcag
gtcgacaagatatgggagttggaagggggcggctcgcgaagcgtcttcatcggcgagtcg
aacggcgtgaccgacaacgcgccgacgccgaagacggtcagcaatctttcgacggtccgc
ggcctgtcgccggaagagcccagcaagcagggcaccttctattccgccggcgtggcccgc
tatggcgccaccaagttcgtcggcggcgacaagcacatgcgcacctactcggtggcgttg
gcgtcgccgttgcccaagttcaagttcccggtcggcgatggcagcatcaccctggtgccg
ttcgccaaatccgtggccggcagcaacatcagtgcgaccagcaatttccagccgaccaat
cagatcgtggacttctacgtccagaaggtggccaacaccgatccgcgcggccgcgatcac
gacgccaataccaacggcggccggccgtatgcggagttccgtatcaactacgaggatgtg
gagcagggcgccgaccacgacatggatgccttcgtgctctacacgctggccgtcaatcag
accaatcagttggtcgtgtccctgtcgtccgagtacgccgctggcggcatcagtcagtac
atgggctatgtgatttccggtaccactgccgatggcgtgtacctggaagtgaaggatcaa
ggcggcgacaatgtcgcttatcgcctgaatacgccgcccggtcgcgcgcccggctattgc
aatacccaggcgcccccgaacgactgcgtcggcctgccgctcaatgccacgcgtaccttc
aatgtgggcaacaacgtgggcgccagcctgctcgagagcccgctctggtacgccgcgaag
tacggcaccgatctcaaccccgacgccaacaacgatggcacgcccgacaactacttcctg
gtgaccaacccgctgtacctgaaggcgcagctcaccaagacgttcgatgcgatcgagaac
cagaacggaagtagcggaaccgtctccgtgtccggtgcacgggtgtcgtccagttcctat
gtggtggcgcccagctacggaaactacaacaacggagcggactgggtcggcgacctgcag
aagttcccggtgctgtcgaatggtctgctggggaccgtgcaatggagcgcggccgccaag
atgccgacggatgccgctggcgtcgcgcagcgcaagatcttcaccgcgctgtcgagcgtg
aattccaccaaccgctccaacgtggtgcgcgagttcaccgccgccaatctggtcgcaacg
ccgagcggcagcgcggcggcggacgcggccgagatcttcaatcgtctcggctacacgacc
ggcgacatcatcaacaagttcggcggcaacgtcacgccaggtcaactggtggactacctg
cgcggcgaccagacgatggaaggcacggccaagaacaccgcgccgttccgccgccgctcg
aagatcctcggcgacatcgtcaactccgcgccggtgatcgcgaccaagcgggcgaactac
ggctgggcgacggccaccggcctggcctccgccgcgcgcggaagctatgcggcttacctg
accagcaaggggcaggcggcgcacgagtacatctacgccggattcaacgacggcatgctg
catgcgttcaacgatgccggcgacgagaccttcgcctatgtgcccaatggcgtgttgggg
aagaccggttttctcgccgacgccggcctcgatggcggctccggttatacccaccggttc
tatgtcgacgggcagctgacgacggccgacgtctatctgggcggccactggaagacggtg
gtggtcggaaccgccggtgccggcggccgcgcggccttcgcgctggacgtcaccgatccg
gcgtcgttctcggccgacgaggtgctctgggagatcaacggacagagcgacaccgaactt
ggctatgcgatgggcaagccggtcgtggtgccgttgcagaacggcaagtgggtggcgctg
atcggcaatggctacaacagcgtcaacagcgatcccgtgttgttcgtcgtggatatcgag
actggcagcgtattggccaagttgcggccgaacgacgatgacgatgtcaacgtcaacggc
ctgggcaatctggtgacgctggataccgacggcaatggcctggtcgacaccgtctatggt
ggcgacctgcagggcaacgtgtggaagttcgatctgagcggcgaccatgcctcggactgg
aacgtcgcctacaacggcgtgccgatgttcgtcgcgcacgacctgcatggcgcacgccag
ccgatcaccggcgagttcgaagtggcgaccggccccggcaatggctacatgctctatttc
ggcaccggacgctatttcaccgtgggcgacaacagcagtgcgatgggccagcaggtgcag
agtctctatggcgtgtgggacagcggaacgccggtgaccggcgaccgggatgcggcgctg
gtcgcccagaccatcacggcctcgaccaccggaactcgctcggtctcgcgcaatgcggtc
aactacctgcagagccgtggctggtacctggacctgctgaccaccaataccgctggcgtg
gcccagacgaccggcgagcgcttcttcggccggccgctcatccagagcggatcggtgtcg
ttctcggcctaccagccggaagtcgcgtcggattgcgatccgggcgggcagaactggctc
tatcgcctgaacctgctgactggcgcgccggcgtatggccaggtgaccttgccggacggg
acggtggtgagcggcggctcggtcggtgccaccgccaccgggtccggtgcccccagccgt
ggcgtggcggtgacgcagccggtcgcgtccgagccggtgtactgcgatcctgccgatccg
aaatgcaccggcgggggcggaccgcagcaatgcaaggaagtcacgttgaaccccaacaaa
cccgaaaactcgctgatctcccagcgttcctgcggaaggcagtcatggcggcaaatcaaa
tga
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