Xanthomonas medicagonis: AB3X07_14825 Help Entry AB3X07_14825      CDS       T10867                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism xmd  Xanthomonas medicagonis Brite KEGG Orthology (KO) [BR:xmd00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:xmd03400]     AB3X07_14825 Enzymes [BR:xmd01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      AB3X07_14825     5.6.2.6  RNA 3'-5' helicase      AB3X07_14825 DNA repair and recombination proteins [BR:xmd03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     AB3X07_14825 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WHD_Lhr WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII Cas3-like_C_2 HTH_9 AAA_25 PhoH Motif Other DBs NCBI-ProteinID:  XEB08103 LinkDB All DBs Position complement(3554494..3558864) Genome browser AA seq 1456 aa AA seqDB search MSLLQDRFHPAVARWFERRFAAPTPAQAAAWPAILDGRHTLVAAPTGSGKTLTAFLAALD ALLREGLRDGALADRTQVLYVSPLKALSNDIQLNLEAPLAGIRAELAALGLPDMEIRTAV RTGDTPQRERAQARRRPPHVLVTTPESLYVLLGSASGREALRHVRTVIVDEIHALAANKR GSHLALSLQRLQQLCATPPLRIGLSATQKPIDAVARFLVGSAAVRDGTPDCAIVDIGYAR ARDLALELPPTPLSASMSNDQWQQVYTRLAELVRAHRTTLVFVNTRRMAERAARHLGELL GNAAVAAHHGSLAREARLLAEQRLKAGELQVLVATASLELGLDIGEVDLVCQLGSPRSIA SFLQRAGRSGHAVGATPKARLFPQSRDDLVECAALLDCVRRGELDALHMLDAPLDVLAQQ LVAEVACQEWEEDALFALVRGAWPYANLPRDRFDAVLRMLSDGFSTRLGPRAGYLHRDAV HRRVRERRGARMAALTSGGTIPETGDYSVLLEPQAETIGTVHEDFAVESLSGDVFQLGNA SYRILRVEAGRVRVEDARGAPPNIPFWLGEAPGRSDELSAGVSRLRAQVERCLEQGGAAQ ALAWLGGELALDAAAAQQLVDYLGRAHAALGALPTQDRIVLERFFDDSGGTQLVIHSVYG SRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTRHSFALEEVLRYLHTSSALDVL VQALLEAPLFGVRWRWNATNALALPRFTGGRKVAPQLQRMKSEDLLATVFPDQVACAENL VGEREIPEHPLVAQTLHDCLHEAMDSEGWLRLLRGIEDGGVRVLARDLAAPSPLAAEALD ARPYAFLDDAPLEERRTQAVHSRRYQDPESADDLGRLDPQAIAAVREEAWPQPRSRDEMH EALLALGALEAAEAAAQAGWPAWLAELAADARATLLQDIDGAGAALWVAAEALALVAPLY PRAVAQPRIAVPDGYAIDAWQREEAVRELLRARLGALGPTTAAALATPLRLPLREVQAAL LALQGDGYVLPGRFSAETDTDEWCERHLLARIHRYTLGRLRREIEPVAPRDYARFLFRWQ HLDGEGRVAGAEALASVLAQLEGFEAPAALWESELLPARVRDYAPAWLDELCSAGRTLWT RLRPSAATAAGAAAGAGSLRSTPILLLPRRSVAQWSRLLPAAAAPAALGSRAQKVATYLD AHGASFFDEIADATRLLSTELEEALAELVAVGRIHCDSYAGLRALLVPASKRPSALSRRR RRVPLSGIQDAGRWALLRAAGDGGDAAAHGAAVEHVARTLLRRYGVVCWRLLEREAAWLP PWRELLRVYRRLEARGEIRGGRFISGLSGEQFALPDAIGLLRQIRRQPHDGAWLCVAAAD PANLLGSVLPGTRVPRVPGARVLYRDGLPMATWAAERFEPLQDMSAADAIVARQRLAEAA PSGPREAIAAMLAGLR NT seq 4371 nt NT seq  +upstreamnt  +downstreamnt atgtcgctgctgcaagaccgcttccatcccgccgtcgctcgctggttcgagcggcgtttc gccgcgccgaccccggcgcaggccgccgcctggccggcgatcctggacgggcggcatacg ctggtggcggcgccgaccggctccggcaagacgctcacggcatttctcgccgcgctcgat gcgctgctgcgtgaaggcctgcgcgacggcgcgctcgccgatcgcacccaggtgctgtac gtgtcgccgctgaaggccttgtccaacgacatccagctcaatctcgaggcgcccttggcc ggcatccgcgccgaactggccgcgctcggcctgcccgacatggagatccgcaccgcggtg cgcaccggcgacactccgcagcgcgagcgcgcgcaggcgcggcggcggccgccgcacgtg ctggtgaccacgcccgaatcgctgtacgtgctgctcggttcggcatcggggcgggaggcg ctgcgccacgtgcgcacggtgatcgtcgacgagatccatgcgctggccgcgaacaagcgc ggcagccacctggcgctatcgctgcagcgtctgcagcagctgtgcgcgacgccgccgctg cgcatcggcctgtcggcgacgcagaagccgatcgacgcggtcgcgcgcttcctggtcggc agcgccgcggtgcgcgacggcacgcccgattgcgcgatcgtcgacatcggctatgcgcgc gcccgcgatctggcgctggagctgccgccgacgccgctcagcgcgagcatgtccaacgac cagtggcagcaggtgtacacgcgcctggccgagctggtgcgcgcgcatcgcaccacgctg gtgttcgtcaacacgcggcgcatggccgagcgcgccgcgcggcatctgggcgaactgctc ggcaacgcggcggtggcggcgcatcacggcagcctggcgcgcgaggcgcggctgctcgcc gagcagcggctcaaggcgggcgagctgcaggtgctggtcgccaccgcctcgctggagctg ggattggacatcggcgaggtggacctggtgtgccagctcggctcgccgcgttcgatcgcc agcttcctgcagcgcgccggacgctccggccacgcggtcggcgcgacgccgaaggcgcgg ctgttcccgcagtcgcgcgacgatctggtcgagtgcgccgcgctgctggactgcgtgcgc cgcggcgagctggatgcgctgcacatgctcgacgcgccgctggacgtgctggcgcagcaa ctggtcgccgaggtggcgtgccaggaatgggaggaggacgcgctgttcgcgctggtgcgc ggtgcctggccgtacgcgaacctgccgcgcgaccgcttcgacgcggtgctgcggatgctc agcgacggcttcagcacccggctcggcccgcgcgccggctacctgcatcgcgacgcggtg catcgccgcgtgcgcgaacgccgcggcgcgcgcatggcggcgctgacctccggcggcacc atcccggagaccggcgactacagcgtgctgctggagccgcaggccgagaccatcggcacg gtccacgaggacttcgcggtcgaaagcctcagcggcgatgtgttccagctcggcaacgcc agctaccgcatcctgcgcgtggaagcggggcgggtgcgggtggaggacgcgcgcggcgcg ccgcccaacatcccgttctggctgggcgaggcgccagggcgcagcgacgaactgtcggcc ggcgtgtcgcggctgcgcgcgcaggtggagcgctgcctggagcagggtggggcggcgcag gcactggcgtggctgggcggggagctggcgctggacgcggccgcggcgcagcaactggtc gattacctcggccgcgcccatgccgcgctcggcgcgctgccgacgcaggaccgcatcgtg ctggagcgcttcttcgacgacagcggcggcacccaactggtgatccacagcgtgtacggc agccgcatcaaccgcgcctggggcctggccctgcgcaagcgcttctgccgcaccttcaat ttcgaactgcaggcggccgcgaccgaggacgcgatcgtgctgtcgctgtccacgcggcac agcttcgcgctggaggaggtgctgcgctatctgcacacgtcctcggcgctggacgtgctg gtgcaggccttgctggaagcgccgctgttcggcgtgcgctggcgctggaacgccaccaac gcgctggcgctgccgcgcttcaccggcggccgcaaggtcgccccgcagctgcagcggatg aagtccgaggatctgttggcgacggtgttccccgaccaggtggcctgcgccgagaacctg gtcggcgagcgcgagatcccggagcatccgctggtcgcgcagacgctgcacgattgcctg cacgaggcgatggacagcgagggctggctgcggctgctgcgcggcatcgaggacggcggc gtgcgcgtgctggcgcgcgacctggccgcgccgtcgccgctggcggccgaggcgctggac gcgcggccgtacgccttcctcgacgacgcgccgctggaggagcgccgtacccaggccgtg cacagccgccgctaccaggatccggagagcgccgacgacctgggccggctggatccgcag gcgatcgccgcggtgcgcgaggaggcctggccgcaaccgcgcagccgcgacgagatgcac gaggcgctgctcgcgctcggcgcgctggaggccgccgaagccgcggcgcaggccggatgg ccggcctggctggcggaactggcggccgacgcgcgcgccaccctgctgcaggacatcgac ggtgccggtgccgcgctgtgggtggcggccgaggcgctggcgctggtcgcgccgctgtac ccgcgggccgtcgcgcagccgcgcatcgccgtgcccgacggctatgcgatcgatgcctgg cagcgcgaggaggccgtgcgcgagctgctgcgcgcgcgcctgggcgcgcttggcccgacc accgcggctgccctggcgacgccgctgcggctgccgctgcgcgaggtgcaggcggccttg ctggcgctgcaaggcgacggctacgtgctacccggccgcttcagcgccgagaccgacacc gacgaatggtgcgaacgccatctgctggcgcgcatccatcgctacacgctcggccgcctg cggcgcgagatcgaaccggtggcgccgcgcgattacgcgcgcttcctgttccgctggcag cacctggacggcgagggccgcgtcgccggcgccgaggcgctggccagcgtgctggcgcaa ctggaaggcttcgaggcgccggcggcgctgtgggaaagcgagctgctgccggcgcgggtg cgcgattacgccccggcctggctggacgaactgtgcagcgccggacgcacgctgtggacg cggctgcgcccgtcggcggcgaccgcggcgggcgcagcggccggcgcgggatcgttgcgc agcacgccgatcctgttgctgccgcggcgcagcgtcgcgcagtggtcgcggctgctgccg gccgcggccgcgccggcggcgctgggatcgcgcgcgcagaaggtcgccacgtacctggac gcgcacggcgcctcgttcttcgacgagatcgccgacgccacgcggctgctgtccaccgag ctggaggaggcgctggcggaactggtggcggtcggccgcatccactgcgacagctacgcc gggctgcgcgccttgctggtgccggcctccaagcggccatcggcgctgtcgcggcggcgc cggcgcgtgccgctgtccggcatccaggacgcgggccgctgggcgctgctgcgcgcggcc ggcgatggcggcgatgcggccgcgcacggcgccgccgtcgaacacgtcgcgcgcactctg ctgcgccgttacggcgtggtgtgctggcgcctgctcgagcgcgaggcggcgtggctgccg ccatggcgcgagttgctgcgcgtctatcgccggctggaggcgcgcggcgaaatccgtggc gggcgcttcatcagcgggctgtccggtgagcagttcgcgctgccggacgcgatcggcctg ctgcgccagatccgtcgccagccgcacgacggcgcctggctgtgcgtcgccgccgccgat ccagccaacctgctcggcagcgtcctgccggggacgcgggtaccgcgcgtgccaggcgcg cgggtgctgtaccgcgatggcctgccgatggcgacgtgggcggcggagcgtttcgagccg ttgcaggacatgtctgccgccgacgcgatcgttgcgcgacaacgcctcgccgaggcggcg ccgtccggcccacgcgaggccatcgccgcgatgctcgccggactgcgctga

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