KEGG   Xanthomonas medicagonis: AB3X07_15865
Entry
AB3X07_15865      CDS       T10867                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
xmd  Xanthomonas medicagonis
Pathway
xmd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:xmd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AB3X07_15865 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xmd03019]
    AB3X07_15865 (rnc)
   03009 Ribosome biogenesis [BR:xmd03009]
    AB3X07_15865 (rnc)
   03036 Chromosome and associated proteins [BR:xmd03036]
    AB3X07_15865 (rnc)
Enzymes [BR:xmd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AB3X07_15865 (rnc)
Messenger RNA biogenesis [BR:xmd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AB3X07_15865 (rnc)
Ribosome biogenesis [BR:xmd03009]
 Eukaryotic type
  90S particles
   RNase
    AB3X07_15865 (rnc)
 Prokaryotic type
  rRNA processing factors
   AB3X07_15865 (rnc)
Chromosome and associated proteins [BR:xmd03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AB3X07_15865 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM Orthopox_F8
Other DBs
NCBI-ProteinID: XEB08299
LinkDB
Position
complement(3798792..3799472)
AA seq 226 aa
MANKTFQRGDRIGHRFADPQLLAQALTHRSAGAPHNERLEFLGDSIVNQMIAEALYQRWP
KADEGALTRARAELVREASLASIGRQLELGERLTLGPGEMKSGGHRRDSILADAVEAVVA
AIYLDAGFEACRAVILPWFETALAALPVGKAEKDAKTRLQEWLQARQRTLPAYELISETG
DDHAKLFRVRCVLAEPALVTEGEGTSRRLAEQQAAAAAIEQLDSSK
NT seq 681 nt   +upstreamnt  +downstreamnt
gtggcgaataagaccttccagcgcggcgaccggatcgggcaccgcttcgccgacccgcag
ctgctggcgcaggcgctgacccatcgcagcgccggcgcgccgcacaacgagcggctggaa
ttcctcggcgacagcatcgtcaaccagatgatcgccgaggcgctgtaccagcgctggccc
aaggccgacgagggcgcgctgacccgcgcccgcgccgaactagtgcgcgaggcctcgctg
gccagcatcggccgccagctggaactgggcgagcggctgaccctggggccgggcgagatg
aagtcgggcgggcaccgccgcgactcgatcctggccgatgcggtcgaggcggtggtcgcg
gcgatctacctggacgccggattcgaggcctgccgtgcggtgatcctgccctggttcgag
acggcgctggccgcactgccggtcggtaaggccgagaaggatgccaagacccgcctgcag
gaatggctgcaggcgcggcaacggacgttgccggcctacgagctgatcagcgagaccggc
gacgaccacgccaaactattccgggtacgctgcgtactcgccgagcccgccctcgtcacc
gagggcgagggcacctcgcgacggctggccgaacaacaggccgccgccgccgccatcgag
caactggattcgagcaagtga

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