Xanthomonas medicagonis: AB3X07_16880
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Entry
AB3X07_16880 CDS
T10867
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
xmd Xanthomonas medicagonis
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xmd02000
]
AB3X07_16880
Transporters [BR:
xmd02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3X07_16880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XEB08489
LinkDB
All DBs
Position
complement(4039909..4042128)
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AA seq
739 aa
AA seq
DB search
MSASWSLRASALAVAVVSALSFPAVAQQADSADGIARLDTIKVTAERRAEDSKDVPVSAS
VLRPEYLDAIATSGSDVRVLAGKAPSLNVESSNGRVFPRFYIRGYGNTDFNTYASQPVSL
IYDDVVAENAFLKGFPIFDLEGLEVLRGPQGTLFGRNTPAGVVKFNSVKPSIGANDGYAS
LSYGTYGTMTMETGLSVAMGDKWAARISALGQRRDDWVDNTIDDRSFEGYTDSAVRVQLL
FQPGEDFSALFNAHARHLDGTARLFRANIFQPGTNQLVAGFDPDKVSIDGKNTQELQTYG
GSANLSWDLGDIVLHSITGYEGIGKYYSRGDIDGGYGAVFAPPSGPGLIAFPVETAGGIK
NLDQYSQELRAESQYSGPINWQAGLYYFHDSVEGENYTYDTLGGGSLSSYQLTRQRNTSW
AAFGSLNYAATERLNLRAGIRYTYDKKTFDVLALDRVTLQEPSTGSTDNSKVTGDLSATY
TINDDVNVYARAARGFRGASFGVPSATAPLTVAAPETVDSYEIGIKSDLFDKRARLSFDI
YDFRVKNQQLTAVGGASNDVRLLNADTSKARGAEFDFEALLTQNLRFTLGGAYNWTRIED
PTLSVGVCRTCTVTDPVNASGRALIDGNVLPQAAKWMGNATLRYGIPVGDDAEFFFFTDW
SYRSEINFFLYDSREFVGQPLLEGGAKIGYNWGAGAYEVSVFCRNCTNQIRATGAIDFNN
LTGFINDPRIVGAQFRANF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccagttggtcgctgcgcgccagtgcgcttgccgttgccgtcgtttccgcgctt
tcgttccccgccgtcgcccaacaggccgacagtgccgacgggatcgcccgtctggacacg
atcaaggtcaccgccgaacgccgcgcggaagactccaaggacgtgccggtgtcggccagc
gtgttgcgcccggagtacttggacgcgatcgccaccagcggctcggacgtgcgcgtgctg
gccggcaaggcgcccagcctgaatgtcgaatcctccaatggccgcgtgttcccgcgcttc
tacatccgcggctacggcaacaccgacttcaacacctacgcctcgcagccggtgtcgctg
atctatgacgacgtggtcgccgagaacgcgttcctgaagggcttcccgatcttcgacctg
gaaggcctggaagtgctgcgcggcccgcagggcacgctgttcggccgcaacacccccgcc
ggcgtggtcaagttcaactcggtcaagcccagcatcggcgccaacgacggctacgccagc
ctgtcctacggcacctacggcaccatgaccatggaaaccggcctgagcgtggcgatgggc
gacaagtgggccgcgcgcatctcggcgctgggccagcgtcgcgacgactgggtcgacaac
accatcgacgaccgctcgttcgagggctacaccgactcggcggtgcgggtgcagttgctg
ttccagccgggcgaggacttcagcgcgctgttcaacgcgcacgcgcgccacctcgacggc
accgcgcggctgttccgcgccaacatcttccagccgggcaccaaccagctggtcgccggc
ttcgacccggacaaggtgtccatcgacggcaagaacacccaggaactgcagacctacggc
ggcagcgccaacctgagctgggacctgggcgacatcgtgctgcactcgatcaccggctac
gagggcatcggcaagtactacagccgcggcgacatcgacggcggctacggcgcggtgttc
gcgccgccgtccggcccgggcctgatcgcgttcccggtggagaccgccggcggcatcaag
aacctggaccagtactcgcaggagctgcgcgccgagtcgcagtacagcggcccgatcaac
tggcaggccggcctgtactacttccacgattcggtggaaggcgagaactacacctacgac
accctgggcggcggcagcctcagcagctaccagctgacccgccagcgcaacacctcgtgg
gcggcgttcggctcgctgaactacgcggccaccgagcgcctgaacctgcgcgccggcatc
cgctacacctacgacaagaagaccttcgacgtgctggcgctggaccgcgtcaccttgcag
gagccgtccaccggcagcaccgacaattccaaggtcaccggcgacctcagcgccacctac
acgatcaacgacgacgtcaacgtctatgcgcgcgccgcgcgcggcttccgcggcgccagc
ttcggcgtgccgtcggcgaccgcgccgctgaccgtggccgcgccggagaccgtggactcc
tacgagatcggcatcaagtcggacctgttcgacaagcgcgcgcgcctgagcttcgacatc
tacgacttccgggtgaagaaccagcagctgaccgcggtcggcggcgcctccaacgacgtg
cgcctgctcaacgccgacacctccaaggcgcgcggcgccgagttcgacttcgaggcgctg
ctgacccagaacctgcgcttcaccctcggcggcgcctacaactggacccgcatcgaggat
ccgaccctgtcggtgggcgtgtgccgcacctgcaccgtgaccgatccggtcaacgcctcc
ggccgcgcgctgatcgacggcaacgtgctgccgcaggcggccaagtggatgggtaacgcg
accctgcgctacggcatcccggtcggcgacgacgccgagttcttcttcttcaccgactgg
tcctaccgcagcgagatcaacttcttcctgtacgactcgcgcgagttcgtcggccagccg
ctgctcgagggcggcgccaagatcggctacaactggggcgccggcgcgtacgaggtctcg
gtgttctgccgcaactgcaccaaccagatccgcgccaccggtgcgatcgatttcaacaac
ctcaccggcttcatcaacgacccgcgcatcgtcggcgcgcagttccgcgccaacttctga
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