Xanthomonas medicagonis: AB3X07_16990
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Entry
AB3X07_16990 CDS
T10867
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd03030
DNA replication
xmd03430
Mismatch repair
xmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3X07_16990
03430 Mismatch repair
AB3X07_16990
03440 Homologous recombination
AB3X07_16990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xmd03032
]
AB3X07_16990
03400 DNA repair and recombination proteins [BR:
xmd03400
]
AB3X07_16990
Enzymes [BR:
xmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3X07_16990
DNA replication proteins [BR:
xmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3X07_16990
DNA repair and recombination proteins [BR:
xmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3X07_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_25
AAA_22
nSTAND3
UBA
TIP49
Motif
Other DBs
NCBI-ProteinID:
XEB08508
LinkDB
All DBs
Position
complement(4065479..4066456)
Genome browser
AA seq
325 aa
AA seq
DB search
MSAAATDALPFAPWQQRAYDQTVAALDAGRLGHGLLICGPDGLGKRAVALKLAAHVLGQG
EPAANLRSAQLIAAGTHPDLQLVSFIPNRTGDKLRTEIVIEQVREISQKLALTPQYGVAQ
VVVVDPADAINRAACNALLKTLEEPQPGRYLWLISAQPARLPATIRSRCQRLEFKLPPAD
EAIAWLLAQEFPEKTAREALDAARGHPGLAAQWLREDGLKLRRQVAADLEQVAAGKLGTL
DAAQRWSADGLAEQRLGHAADLALAQASQAGLTDPARLHKLATWFDAANRTRDLLRTTVR
GDLAIAELLLAWRDGDRPARKGTQR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgcggcgaccgacgcgctgcccttcgcgccctggcagcagcgcgcctacgac
cagaccgtggccgcgctcgacgccggccgcctcggccatggtctgctgatctgcgggccg
gatggcctgggcaagcgcgcggtggcgctgaagctggccgcgcacgtgctgggccagggc
gaaccggccgcgaacctgcgcagcgcgcagttgatcgccgccggcacccatccggacctg
caactggtctcgttcatccccaaccgcaccggcgacaagctgcgcaccgagatcgtcatc
gaacaggtgcgcgagatctcgcagaagctggcgctgaccccgcagtacggcgtggcccag
gtggtggtggtggatccggccgatgcgatcaaccgcgcggcctgcaacgccttgctcaag
accctggaggagccgcaacccggccgctacctgtggctgatcagcgcgcagccggcgcgg
ctgccggcgaccatccgcagccgttgccagcgcctggagttcaagctgccgccggccgac
gaggcgatcgcctggctgctggcccaggagttcccggagaagaccgcgcgcgaagcgctg
gacgccgcgcgcggccatcccggcctggccgcgcagtggctgcgcgaggacggcctgaag
ctgcgccggcaggtcgccgccgacctggagcaggtcgccgccggcaagctcggcacgctc
gacgcggcgcagcgctggagcgccgacggcctggccgagcagcgcctgggccacgccgcc
gatctggcgctggcacaggcctcgcaggccggcttgaccgacccggcgcgattgcacaag
ctggccacctggttcgacgcagccaatcgcacccgcgacctgctgcgcaccaccgtccgt
ggcgacctggccatcgcggaactgttgctggcctggcgcgacggcgatcgcccggcccgg
aaggggacacaacgatga
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