Xanthomonas medicagonis: AB3X07_18645
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Entry
AB3X07_18645 CDS
T10867
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
xmd Xanthomonas medicagonis
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xmd03000
]
AB3X07_18645
Transcription factors [BR:
xmd03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
AB3X07_18645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
HTH_20
HVO_A0114
HTH_23
DUF977
HVO_A0261_N
HTH_24
FeoC
SpoIIID
HTH_28
WHD_BrxR
Dimerisation
MarR
HTH_7
WHD_RecQ_mid_bact
RepL
HTH_10
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
XEB08808
LinkDB
All DBs
Position
4400077..4400856
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AA seq
259 aa
AA seq
DB search
MSVTRDTSQRRLQISELVRQHGSVQVSALAQQFGVSLQTVRKDLRYLAERGVMARAYGGG
IDSSAVNAAPVEPHYDAKRTVHLEEKRRIGLRAAALVQPGNTIAIDSGTTAIQLAEALPD
IDMTVVTNDFGVLTALSPKTHINLVMLGGELRRKNMAFYGGLTVEALDALHVDLLFLGVD
GFDLERGITTHYEPEAMLNRKMVEAARAVIAITDSSKFGKICLHRIIPVSELDALITDTG
APEDVVHACQALGVDLVRA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcacccgcgacaccagccagcgccgcctccagatcagcgaattggtccgccag
cacggcagcgtgcaggtgtccgcgctggcgcagcagttcggggtgagcctgcagaccgtg
cgcaaggacctgcgctacctcgccgaacgcggggtgatggcgcgcgcctacggcggcggc
atcgacagcagcgcggtcaacgccgcgccggtcgagccgcattacgacgccaagcgcacc
gtgcacctggaggagaagcgccgcatcggcctgcgcgcggcggcgctggtgcagccgggc
aataccatcgccatcgattcgggcaccaccgcgatccagttggccgaggcgctgccggac
atcgacatgaccgtggtcaccaacgacttcggcgtgctcaccgcgctcagccccaagacc
cacatcaacctggtgatgctgggcggcgaactgcggcgcaagaacatggccttctacggc
ggactcaccgtcgaggcgctggacgcgctgcacgtggacctgctgttcctgggcgtggac
ggcttcgacctggaacgcggcatcaccacccactacgagcccgaggcgatgctcaaccgc
aagatggtggaggcggcacgcgcggtgatcgccatcaccgacagctccaagttcggcaag
atctgcctgcaccggatcatcccggtgtccgagctggacgcgctgatcaccgacaccggc
gcgcccgaggacgtggtccacgcctgccaggcgctgggcgtggacctggtgcgcgcctga
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integrated database retrieval system
