Xanthomonas medicagonis: AB3X07_20635
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Entry
AB3X07_20635 CDS
T10867
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd00230
Purine metabolism
xmd01100
Metabolic pathways
xmd01110
Biosynthesis of secondary metabolites
Module
xmd_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
AB3X07_20635 (purD)
Enzymes [BR:
xmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
AB3X07_20635 (purD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_2
ATP-grasp_5
DUF7426
RimK
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
XEB09182
LinkDB
All DBs
Position
4867288..4868577
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AA seq
429 aa
AA seq
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MKLLVIGSGGREHALAWKLAQSPRVSAVLVAPGNAGTATEAKCRNVAVKVDDLDGLLALA
RDEAVALTVVGPEVPLVLGVVDRFRAAGLRIFGPTAAAAQLEGSKAYAKAFLQRHGIPTA
FYEVHTEVDAALAYVRAKGAPIVVKADGLAAGKGVIVAMTLDEAEAAVRDMLSGNAFGDA
GARVVIEEFLDGEEASFISMVDGATALPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVT
PEVHARVMREVVEPTVQGMIADGVPFTGFLYAGLMIDASGAPKVIEFNVRFGDPETQPVM
LRLQSDLLDLVDAAIDGRLHATQAQWDPRPSLGVVLAAAPYPETPVTGEAIDGLDQVPAS
AKVFHAGTALDAQGRVVSAGGRVLCVAALGDSVSEAQRNAYAGVAQIHWASEFHRSDIGW
RAIARERGA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctcgtcatcggctccggcggccgcgaacacgccctggcgtggaagctggcc
cagtccccgcgcgtcagcgccgtgctggtcgctcccggcaatgccggcaccgcgaccgag
gccaagtgccgcaatgtcgcggtcaaggtcgacgacctcgatggcctgctcgcgctggcc
cgggacgaggcggtggcgctgaccgtggtcggcccggaagtgccgctggtgctgggcgtg
gtcgatcgcttccgtgccgccgggctgcgcatcttcggccccaccgccgccgccgcgcag
ctggaaggcagcaaggcctacgccaaggcgttcctgcagcgccacggcatcccgaccgcg
ttctacgaggtgcataccgaggtggacgcggcgctggcctacgtccgcgccaagggcgcg
ccgatcgtggtcaaggccgacggcctggccgcgggcaagggcgtgatcgtggcgatgacc
ctggacgaggccgaggccgcggtgcgcgacatgctctccggcaacgccttcggcgacgcc
ggcgcgcgcgtggtgatcgaggaattcctcgatggcgaggaagccagcttcatctccatg
gtcgatggcgccaccgcgctgccgatggccaccagccaggaccacaagcgcgtcggcgac
ggcgacaccggccccaacaccggcggcatgggcgcctattcgccggcgccggtggtcacg
ccggaggtgcatgcgcgggtgatgcgcgaggtggtggagccgaccgtgcagggcatgatc
gccgacggcgtgccgttcaccggcttcctctacgcggggctgatgatcgacgccagcggc
gcgcccaaggtgatcgagttcaacgtgcgcttcggcgacccggaaacgcagccggtgatg
ctgcgcctgcagtcggacctgctggacctggtcgacgcggcgatcgacggccgcctgcac
gccacccaggcgcagtgggatccgcgcccatcgctgggcgtggtgctggcggcggcgccg
tatccggagacgccggtcaccggtgaagcgatcgacggcctggaccaggtgcccgcgagc
gccaaggtcttccacgccggcaccgcgctggacgcgcagggccgcgtggtcagcgccggc
ggccgcgtgctgtgcgtggcggcgctgggcgacagcgtgtccgaggcgcaacgcaacgcg
tatgccggcgtggcgcagatccactgggccagcgagttccatcgcagcgacatcggctgg
cgcgcgatcgcgcgcgaacgcggcgcatag
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