Xanthomonas medicagonis: AB3X07_21540
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Entry
AB3X07_21540 CDS
T10867
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
xmd Xanthomonas medicagonis
Pathway
xmd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB3X07_21540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xmd02022
]
AB3X07_21540
Two-component system [BR:
xmd02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
AB3X07_21540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4
Sigma70_r4_2
HTH_23
HTH_68
HTH_10
HTH_40
HTH_IclR
HTH_11
HTH_24
HTH_Tnp_ISL3
HTH_28
HTH_20
DUF2089
HTH_29
HTH_38
HTH_7
DUF6115
DUF742
Phage_terminase
HTH_5
HTH_58
HTH_50
Motif
Other DBs
NCBI-ProteinID:
XEB09349
LinkDB
All DBs
Position
complement(5056707..5057309)
Genome browser
AA seq
200 aa
AA seq
DB search
MIRLVLAEDQAMVRGALGALLGLEADLAVVASAADGEAAWRALQAHRPDLLVTDIEMPGL
SGLELAQRVQRQQLPIRVVIVTTFARPGFLRRALDAGVGGYLLKDAPPERLVDAIRQVHR
GGRAIDPELALEAWSEADPLNDRERQVLRLAGEGASAGDIAAQLGLSHGTVRNYLSEAIG
KLGVGNRIEAARLARQKGWL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgattagtgctggcggaagaccaggcgatggtacgcggcgcgctgggcgcgctg
ctgggcctggaagcggacctcgccgtggtcgccagcgccgccgacggtgaggccgcgtgg
cgcgcgctgcaggcgcaccggccggacctgctggtcaccgacatcgagatgcccgggctc
agcggcctggaactggcgcagcgcgtgcagcgccagcagctgccgatccgcgtggtcatc
gtcaccaccttcgcccgccccggcttcctgcgccgcgcgctggacgccggcgttggcggc
tatctgttgaaggatgcgccgccggagcgcctggtcgatgcgattcgccaggtgcatcgc
ggtggccgcgcgatcgatccggagctggcgctggaggcctggtccgaggccgatccgctc
aacgaccgcgagcgccaggtgctgcgcctggccggcgagggcgcctcggccggcgacatc
gccgcgcagttggggctctcgcacggcaccgtgcgcaactatctgtccgaggcgatcggc
aagcttggcgtcggcaaccgcatcgaggcggcgcggctggcgcggcagaagggttggcta
tag
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integrated database retrieval system
