Xanthomonas medicagonis: AB3X07_22860
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Entry
AB3X07_22860 CDS
T10867
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB3X07_22860 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xmd03400
]
AB3X07_22860 (mutM)
Enzymes [BR:
xmd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB3X07_22860 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB3X07_22860 (mutM)
DNA repair and recombination proteins [BR:
xmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB3X07_22860 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR_2
DUF6011
Motif
Other DBs
NCBI-ProteinID:
XEB09595
LinkDB
All DBs
Position
complement(5398005..5398817)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGLEPHLQGRRIHGVILRRPDLRWPIPPEVAQQLPGQRIDGIRRRAKYL
LLDTPAGSALLHLGMSGSLRVLPGDTPPRAHDHVDISLEDGRVLRFNDPRRFGCLLWQAP
GQLHPLLEELGPEPLSAEFDGDYLFRRSRGRTAPVKTFLMDQRIVVGVGNIYAAESLFQA
GISPLREAGEVSRARYARLAEAAKAILGYAIARGGTTLRDFISPDGAPGYFEQELAVYGR
EGEACKRCGRPLRHASIGQRASVWCGSCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaagtcgaaaccacccggcgcggtctggagccgcatctgcagggg
cggcgcatccatggcgtgatcctgcgccgcccggacctgcgctggccgatcccgccggag
gtggcgcagcagctgccgggacagcgcatcgacggcatccgccgccgcgccaagtacctg
ttgctggacacgccggccggcagtgcgctgctgcacctgggcatgtccggcagcctgcgg
gtgttgcccggcgacacgccgccgcgggcgcacgaccacgtcgacatcagcctggaagat
ggccgcgtgctgcgcttcaacgacccgcgccgcttcgggtgcctgctgtggcaggcgccg
ggccagctccacccgctgctggaggagctggggccggagccgttgtcggccgaattcgac
ggagattacttgttcaggcgtagccgtggccggactgcgccggtgaagacgttcttgatg
gatcaacgcatcgtggtcggagtcgggaacatctatgccgccgaaagcctgttccaggcc
gggatcagtccgctgcgcgaggccggggaggtgtcgcgggcacgctacgcgcgcctggcc
gaggcggccaaggcgatcctcggctatgccatcgcccgcggtggcaccaccctgcgcgac
ttcatcagccccgacggcgcgcccggctatttcgaacaggaactggcggtctacggccgc
gagggcgaggcctgcaagcgctgcgggcggccgctgcgccacgccagcatcggccagcgc
gccagcgtctggtgcgggagttgccagcgctga
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