KEGG   Xenorhabdus nematophila ATCC 19061: XNC1_0409
Entry
XNC1_0409         CDS       T01274                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
xne  Xenorhabdus nematophila ATCC 19061
Pathway
xne00300  Lysine biosynthesis
xne00470  D-Amino acid metabolism
xne01100  Metabolic pathways
xne01110  Biosynthesis of secondary metabolites
xne01120  Microbial metabolism in diverse environments
xne01230  Biosynthesis of amino acids
Module
xne_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:xne00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    XNC1_0409 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    XNC1_0409 (dapF)
Enzymes [BR:xne01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     XNC1_0409 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: CBJ88486
UniProt: D3VHZ7
LinkDB
Position
342781..343623
AA seq 280 aa
MILGSYMQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLADRNTGIGFDQLLVVEAPYDP
DLDFHYRIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIKVSTRSGQMVLSVTNDDQI
RVNMGEPDFEPQRVPFRANKAEKTYIIRAVERTVLCGVVAMGNPHCVIQVEDVNTADVEV
LGPALENHERFPERVNVGFMQIMNRGHIRLRVFERGAGETRACGSGACAAVAVGIQQDLL
DNQVSVDLPGGSLQIRWDGPGKPLFMTGPATHVYDGMIHL
NT seq 843 nt   +upstreamnt  +downstreamnt
ttgatcttggggtcgtatatgcagttctccaaaatgcacggtcttggcaatgactttatg
gtcgttgatgcagtaacccagaatgtttatttttctcctgagttaatctgccgtttggct
gacaggaacacgggaatcggttttgatcagcttctggttgttgaggcaccctatgatcct
gacctagacttccactatcgcatttttaatgctgatggcagcgaagtttcccaatgcggt
aacggagcacgctgttttgcccgttttgttcgtcttaaggggttgacgaataaacgcgat
atcaaggtcagtacacgatcaggtcagatggttttgagtgtcacaaatgatgatcaaatc
cgtgtcaacatgggcgagccagattttgaaccgcagcgtgttccttttcgggccaataag
gctgaaaaaacctatatcatccgtgctgttgaacgtacggtgctttgcggtgtggtggca
atgggcaatccccattgtgtcatacaggttgaggatgtgaacactgccgacgtggaagtt
ctgggaccggcgttggaaaatcatgaacgttttcctgaacgggtgaatgtaggtttcatg
cagataatgaatcgaggtcatattcggttgcgagtcttcgagcgtggtgctggcgagaca
cgggcctgtggtagtggtgcctgtgcggcagtggctgtcggcattcagcaagatctgctg
gataatcaggtgagcgtggatcttcccggcggctctctgcaaattcgttgggatgggccg
ggtaaaccgctctttatgactgggcctgcaacccacgtttatgacggcatgattcatttg
tga

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