Xenorhabdus nematophila ATCC 19061: XNC1_0409
Help
Entry
XNC1_0409 CDS
T01274
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00300
Lysine biosynthesis
xne00470
D-Amino acid metabolism
xne01100
Metabolic pathways
xne01110
Biosynthesis of secondary metabolites
xne01120
Microbial metabolism in diverse environments
xne01230
Biosynthesis of amino acids
Module
xne_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XNC1_0409 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XNC1_0409 (dapF)
Enzymes [BR:
xne01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XNC1_0409 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CBJ88486
UniProt:
D3VHZ7
LinkDB
All DBs
Position
342781..343623
Genome browser
AA seq
280 aa
AA seq
DB search
MILGSYMQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLADRNTGIGFDQLLVVEAPYDP
DLDFHYRIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIKVSTRSGQMVLSVTNDDQI
RVNMGEPDFEPQRVPFRANKAEKTYIIRAVERTVLCGVVAMGNPHCVIQVEDVNTADVEV
LGPALENHERFPERVNVGFMQIMNRGHIRLRVFERGAGETRACGSGACAAVAVGIQQDLL
DNQVSVDLPGGSLQIRWDGPGKPLFMTGPATHVYDGMIHL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgatcttggggtcgtatatgcagttctccaaaatgcacggtcttggcaatgactttatg
gtcgttgatgcagtaacccagaatgtttatttttctcctgagttaatctgccgtttggct
gacaggaacacgggaatcggttttgatcagcttctggttgttgaggcaccctatgatcct
gacctagacttccactatcgcatttttaatgctgatggcagcgaagtttcccaatgcggt
aacggagcacgctgttttgcccgttttgttcgtcttaaggggttgacgaataaacgcgat
atcaaggtcagtacacgatcaggtcagatggttttgagtgtcacaaatgatgatcaaatc
cgtgtcaacatgggcgagccagattttgaaccgcagcgtgttccttttcgggccaataag
gctgaaaaaacctatatcatccgtgctgttgaacgtacggtgctttgcggtgtggtggca
atgggcaatccccattgtgtcatacaggttgaggatgtgaacactgccgacgtggaagtt
ctgggaccggcgttggaaaatcatgaacgttttcctgaacgggtgaatgtaggtttcatg
cagataatgaatcgaggtcatattcggttgcgagtcttcgagcgtggtgctggcgagaca
cgggcctgtggtagtggtgcctgtgcggcagtggctgtcggcattcagcaagatctgctg
gataatcaggtgagcgtggatcttcccggcggctctctgcaaattcgttgggatgggccg
ggtaaaccgctctttatgactgggcctgcaacccacgtttatgacggcatgattcatttg
tga
DBGET
integrated database retrieval system