Xenorhabdus nematophila ATCC 19061: XNC1_0565
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Entry
XNC1_0565 CDS
T01274
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00250
Alanine, aspartate and glutamate metabolism
xne00310
Lysine degradation
xne00350
Tyrosine metabolism
xne00650
Butanoate metabolism
xne00760
Nicotinate and nicotinamide metabolism
xne01100
Metabolic pathways
xne01120
Microbial metabolism in diverse environments
Module
xne_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
XNC1_0565 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
XNC1_0565 (gabD)
00310 Lysine degradation
XNC1_0565 (gabD)
00350 Tyrosine metabolism
XNC1_0565 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
XNC1_0565 (gabD)
Enzymes [BR:
xne01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
XNC1_0565 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
XNC1_0565 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
XNC1_0565 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
CBJ88639
UniProt:
D3VIT9
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All DBs
Position
484829..486262
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AA seq
477 aa
AA seq
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MNISENPFFHQQAYINGQWCDADNKETLTVSDPATGKVIGQIPNMAASEVKQAIQAAYDA
LPKWQVQTGHQRAQLLQNWFRLISENKKRLAEIMTLEQGKPLVEAEGEITYAASFIEWFA
EQGKRTNGEIIPSPTSDKRLMVIKQGIGVCAAITPWNFPAAMITRKAAPALAAGCTMIIK
PANETPFTALAMVDLAIQAGIPAGVINIITGHSRIIGEILTSDDRVRKLSFTGSTEVGRL
LMRQCSDSIKKVSLELGGNAPFIVFEDADIEKAVEGAMAAKFRNAGQTCVCANRLYIHRD
IYPAFSQRFVEDVQKLQVGNGFDQGTQIGPLINAESADKVQFLLDDALNKGADLLYGGKR
HALGDNFFIPTVIGRVAENSLILEEEIFGPIAPLVIFDDEESVIASANNTIYGLAAYFYT
ENPQRIWRVSEKLDYGMVGINTGLISNEVAPFGGIKQSGLGREGSTHGIDDYLAISA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatttcagaaaatcctttctttcatcaacaggcttacatcaatgggcagtggtgc
gatgctgataataaagagacgttaactgtctctgatccggcaaccggaaaggtcatcggg
cagatacccaatatggcagccagtgaagtgaaacaagccattcaagctgcatacgacgca
ttaccgaaatggcaagtacaaacgggtcatcaacgtgctcagctattacaaaattggttt
cgcttaatcagtgaaaataaaaaacggctggcagaaatcatgacgctggagcagggtaaa
ccgctggtggaagctgaaggtgaaatcacctatgctgcttcttttattgagtggtttgcg
gaacaaggaaagcgcacaaacggagagattatcccttctccgacgtcggataaacggctg
atggtgattaaacagggcatcggtgtttgtgcggccatcacaccctggaattttcctgct
gcgatgattacccgcaaagctgcacccgcgctggcggcgggttgtactatgataataaag
ccggcaaatgaaacaccatttacggcgttggcaatggtggatttagccattcaagccggt
attccggccggggtgatcaatatcatcaccggccattcccgtattattggtgaaatactc
acgagcgatgatcgcgtacgtaaactgagttttacgggttccactgaggtcgggcgttta
ttaatgcggcaatgctcggacagcataaaaaaagtctctttagaattggggggcaatgcc
ccttttattgtttttgaagatgctgatattgaaaaagcggtagagggggcgatggctgcc
aaattccgcaatgcggggcagacctgcgtctgcgcaaatcgtttgtatattcaccgagat
atttatccggcattcagtcagcgttttgttgaagacgtgcaaaaactgcaagtcggtaac
ggttttgatcaaggaacacaaataggcccgctgattaatgctgaatcagcggataaagtt
cagttccttttagatgatgcactaaataaaggcgcagatttattatatggcggtaagcgc
catgcgttaggggataatttctttataccgactgtcattggtcgtgtcgctgaaaatagc
ctgatattagaagaagaaatattcgggcccattgcgcctttggttatttttgatgatgaa
gagagtgttatcgcctctgccaacaacaccatttatgggcttgctgcttatttttatact
gaaaatccacaacgtatttggcgtgtttcagaaaaattagactatggcatggtaggtatt
aatacggggcttatttccaatgaagtcgcgccgtttggcggaataaaacaatcggggctg
gggcgtgaaggttcgacccacggtattgacgattatttagcaatttcggcgtaa
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