Xenorhabdus nematophila ATCC 19061: XNC1_0586
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Entry
XNC1_0586 CDS
T01274
Symbol
thiC
Name
(GenBank) 5'-phosphoryl-5-aminoimidazole = 4-amino-5-hydroxymethyl-2-methylpyrimidine-P
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00730
Thiamine metabolism
xne01100
Metabolic pathways
xne01240
Biosynthesis of cofactors
Module
xne_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
XNC1_0586 (thiC)
Enzymes [BR:
xne01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
XNC1_0586 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CBJ88660
UniProt:
D3VJA4
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All DBs
Position
complement(500717..502708)
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AA seq
663 aa
AA seq
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MSKSNDTVVSNTAIQNTIIPTADISLQAHPARPRKAQRDAAQAFINSVQGITFPNSKRIY
LEGSRPDIQVPMREIRLSPTLIGSTKENPQFEENESIPVYDTSGPYGDPTSVLDVQTGLS
QIRQPWIDERNDTEPVPVLSSDFTQQRLADAGLDHLRFHHRPHPLKARQGKRVTQLHYAR
QGIITPEMEFIALRENMGRERIRSEVLRQQHPGQNFGANLPENITPEFVRQEVAAGRAII
PANINHPESEPMIIGRNFLVKVNANIGNSSVTSSIEEEVEKLIWSTRWGADTVMDLSTGR
YIHETREWILRNSPVPIGTVPIYQALEKVNGIAENLTWEMFRDTLLEQAEQGVDYFTIHA
GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYTHFREICEICAAYDVSLSLGD
GLRPGSIQDANDEAQFSELHTLGELTKIAWEYDVQVMIEGPGHIPMQLIRRNMTEELEHC
HEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGL
ITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPDTARAYHDEALPQES
GKVAHFCSMCGPKFCSMKITQDVRDYAAKLEQESGMEQMSETFRARGSELYHSADEVAHE
KYV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtccaacgataccgttgtttcaaataccgctattcaaaataccattatcccg
acggcagatatctcgctccaagcccacccagcaagaccccgcaaggctcaaagagatgcc
gcacaagcgtttatcaattcagttcaggggataacgtttcccaactcaaaacgcatttat
ctcgaaggatcccgcccagatatccaggttccgatgcgtgagatccggctctctcccaca
ctcatcggcagcacaaaagagaaccctcagtttgaggaaaatgaatcgatacctgtttat
gatacttccggcccttatggcgatcccacttctgtgctggatgtacaaacgggtttaagt
cagatccgccagccgtggatcgacgaacgcaatgataccgagcctgttcccgttctcagt
tccgatttcacccaacaacgcctcgccgatgccgggctggatcacctgcgttttcaccat
cgcccgcatccgttgaaagccagacaaggcaagcgtgttacccaattgcactatgcacgc
caaggtatcatcacccctgaaatggaatttatcgccctgcgtgaaaatatgggacgtgaa
cgtattcgcagtgaagtgctccgccagcaacatccgggacaaaatttcggtgccaattta
ccggaaaacatcacacccgaatttgtccgtcaggaagttgccgccggccgggcgattatt
cccgccaacattaaccatccggaatccgaaccgatgattatcggccgcaacttcttggta
aaagtgaatgccaacattggtaactcttccgtgacttcgtccatcgaagaagaagtggaa
aaactgatttggtctacccgttggggcgcggataccgtgatggatctctccaccggacgc
tacatccacgaaacccgcgaatggatactgcgcaacagccctgttccgattggcacagtc
ccgatttatcaggcactggaaaaagtcaacggcatcgcagaaaacctgacatgggagatg
ttccgcgatacgttgttagagcaagccgaacaaggggtggattatttcaccattcatgcc
ggcgtgttgctgcgttatgtcccgatgaccgccaaacggctgacaggcattgtttcccgt
ggtggctcaattatggcgaaatggtgcctttcccatcatcaggaaaatttcctctacact
cacttccgcgaaatctgtgaaatctgcgccgcctatgacgtatccctctctttaggagat
ggcctgcgccccggttcaattcaggatgccaacgacgaagcacaattttctgaactgcat
accctcggtgaactgaccaaaatcgcatgggagtatgatgtccaggtcatgatagaaggg
ccggggcatatcccgatgcaattaatccgccgcaatatgacagaagagctggagcattgc
cacgaagccccattctatacattagggccgctaacgacggatatcgcccccggttatgac
catttcacttctggcattggtgctgccatgattggctggtttggctgcgccatgctgtgt
tatgtcacgcctaaagagcacctcggtttgcctaacaaagaagatgtgaagcaaggcctg
atcacctacaaaatcgcagcacatgcggctgatcttgccaaaggccatcccggtgctcaa
atccgtgacaatgccatgtcaaaagcgcgttttgaattccgttgggaagatcaattcaat
ctggcactggatcctgataccgcccgtgcttatcacgatgaagccttaccgcaagaatcc
ggtaaagtcgctcatttctgctcaatgtgcggacccaaattctgttccatgaaaattacc
caagatgtacgcgattatgcggcaaaactggaacaagaatccggtatggaacagatgtca
gaaacgtttcgtgcccgtggcagcgagctttatcacagcgccgatgaggtagctcatgaa
aaatacgtctga
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