Xenorhabdus nematophila ATCC 19061: XNC1_0665
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Entry
XNC1_0665 CDS
T01274
Symbol
rpoH
Name
(GenBank) sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins
KO
K03089
RNA polymerase sigma-32 factor
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xne03021
]
XNC1_0665 (rpoH)
Transcription machinery [BR:
xne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XNC1_0665 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
IF2_N
HTH_3
HTH_10
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
CBJ88736
UniProt:
D3VJI0
LinkDB
All DBs
Position
577944..578801
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AA seq
285 aa
AA seq
DB search
MTKEMQTLALVPQGSLEGYIRASNTYPMLSAEEERELAERLHYQGDLDAAKKLILSHLRF
VVHVARSYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEIELVAKELGVTSKDVREMESRMSAQDM
AFDMSADDDNHDSQPVAPVLYLQDKASDFADGIEEDNWENHAADKLSVAMEGLDERSQDI
IRARWLDDENKTTLQELADKYGVSAERVRQLEKNAMKKLRLAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaatgcaaactttagcattggttccacaaggtagtttggaagggtacatt
cgtgcctccaacacttatcctatgctctccgcggaggaagaaagggaactggcagaaagg
ctgcattaccagggagatctggatgcagcgaaaaagctaattctttctcacctgcgcttc
gttgttcatgttgctcgcagttatgccggttatggtttgccacaggcggatttaattcag
gaaggtaatattggcctgatgaaagccgttcgtcgatttaatccagaagtgggcgtgcgt
ctggtttcgtttgctgttcactggattaaggcagaaatccacgaatatgtactgcgtaat
tggcgtattgtgaaagttgcaacgacaaaggcccagcgcaaactattctttaatttgcgc
aaagctaaacaacgcttgggatggttcaatcaggatgaaattgagctggtcgccaaagaa
ttgggcgtgaccagcaaagatgtccgagagatggaatcccgcatgtcagcgcaggatatg
gcattcgatatgtctgctgatgatgacaatcatgatagtcagcccgttgcgccagtactg
tatttgcaagataaagcttctgattttgccgatggcattgaagaagataactgggaaaac
catgctgcggataaactgtctgtggcaatggaaggactggatgagcgtagtcaggacatc
atccgtgctcgttggttggatgatgagaacaaaactaccttgcaggaactggcagataaa
tatggtgtatctgcggagcgtgttcgacagctggaaaaaaatgcaatgaagaaattgcga
ctggcgattgaagcataa
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