Xenorhabdus nematophila ATCC 19061: XNC1_0684
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Entry
XNC1_0684 CDS
T01274
Symbol
slt
Name
(GenBank) lytic murein transglycosylase, soluble
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xne01011
]
XNC1_0684 (slt)
Enzymes [BR:
xne01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
XNC1_0684 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
xne01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
XNC1_0684 (slt)
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
CBJ88755
UniProt:
D3VJJ9
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Position
593038..595014
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AA seq
658 aa
AA seq
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MSLACLFGNDSSLLKGYMAMSKWQHFAMAVSMVSVVAGIAHADSLDTQRQRYQEIKQAWD
TKNRVEVARLMPTLKDYPLYPYLEYRQLTQDLALATPQQIEHFIHTYPTLPPARSLASRF
VDVLASSGDWSGLLAFSPNPPSTVAGRCHFYFAQWATGYQQVAWKGAEKIWLNGNSLPDN
CNKLLDVWEQTGHLSAHLILQRIELALKENNSTLVTYLSKRLPSDYQGLGSSLLKLQQDP
AFIEQFAVTTTPTDFTRSVIMTIFPRFARGNAELARVNIPVFARAQKMNDTERQQLKDLV
AWQLMGDVTPEQAKWRDDSIQNSQSTKLLERRVRLALKDDDYADLGSWLALLPKTVLQQD
EWQYWSAILLLRQGKITEGNTILRKLTEHRGFYPMVAAQKLHLPYPLTINKSERPDASIA
NMPEIRRIRELLYWNMDDLARSEWVHLVSSQNPLKQEQLARYAFEQHWPAFSVQATIAGK
MWDHLEERFPLAWHNEFADFTSDKGISQSYAMAIARQESAWNPQARSAKGASGLMQIMPK
TAEHTVKSQKIQGYISSSQLMNPAMNIKIGTAYLDSVYQRFDNNRILASAAYNAGPTNVD
RWLASTSGRLDPIAFIESIPFSETRSYVKNVLAYDMFYHNFMGKMSDILTSAEWQRRY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggcatgtttatttggcaatgatagtagtcttctgaaggggtatatggcaatg
agtaagtggcagcattttgcaatggctgtgagtatggtttctgttgttgcgggaatcgca
catgctgattctttggacactcaacgccagcgctaccaagaaataaaacaagcgtgggat
acaaagaatagggtagaagtcgcacgtcttatgccaacactgaaagactatcccctttac
ccctatcttgaatatcgtcaattaactcaggatctggctcttgctactcctcagcaaatt
gaacattttattcatacttatcctaccctaccaccagcacgctcactggcatcccgattt
gttgatgttctggcaagcagtggtgactggtctggtcttctggcattcagccccaatcct
cccagtacggtagcagggcgctgtcatttttactttgctcaatgggccacaggttatcag
caagttgcatggaaaggtgccgaaaaaatttggctaaatggcaattcattgcctgataac
tgcaataagctgcttgatgtctgggaacaaaccgggcatttatctgcacatttaattttg
caacgtattgaattagcgctgaaagagaataactcgacacttgttacttatctgtccaag
cgtttaccgtcagactatcagggattaggttcaagtttgctcaaactacaacaagatccg
gcattcattgaacaatttgctgtaaccaccacaccgacagattttacccgttcagttatc
atgacaatttttccacgttttgcccgcggaaatgctgaactggccagagtcaatattccc
gtatttgctcgtgcacaaaaaatgaatgataccgagaggcagcaactaaaagatctggtt
gcatggcagctaatgggagatgtcacgccagaacaggcaaaatggcgtgatgatagtatt
cagaattcacaatctaccaagctacttgaacggcgcgtccgcttagcattgaaggatgat
gattatgcggatcttggcagctggctggcattgctgccaaaaacggttttacaacaagat
gaatggcaatattggagtgcaattctcctgctcagacaaggaaaaatcactgaaggcaat
acaatattacgtaagctgacagaacaccgcggtttttatcctatggtggcagcccagaaa
ttgcatttaccctatcctctgaccatcaataaatctgaaagacccgatgcgtctattgcg
aatatgccagaaattcggcgcattcgtgagttactgtattggaatatggatgatctggcc
cgttcagagtgggttcatttagtctcttctcaaaatccattgaagcaggagcaattggca
cgttatgcgtttgaacaacactggcctgcatttagtgttcaagccacgattgcaggaaaa
atgtgggatcatcttgaagagcgttttcctttggcatggcataacgaatttgcagatttc
acgtcagacaaaggtatttcacaaagttatgccatggcaatcgcccgtcaggaaagtgca
tggaacccacaagcgcgttccgctaaaggtgccagcgggttaatgcaaatcatgcccaaa
actgccgaacatacggtgaagagtcaaaaaattcaaggctatatcagcagcagtcaatta
atgaatccggccatgaatattaaaattggcactgcctatctggattcggtttaccaacgt
tttgacaataaccgcattcttgccagtgccgcctataacgccggccctacaaatgttgat
cgctggctggccagtacttccggacgccttgatcccatcgcgtttattgagagtatccct
ttttctgaaacacgctcgtatgtcaaaaacgttcttgcctatgatatgttctaccataat
ttcatggggaaaatgtcggatatactgaccagtgccgaatggcagaggcgttattaa
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