Xenorhabdus nematophila ATCC 19061: XNC1_0747
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Entry
XNC1_0747 CDS
T01274
Symbol
sbcD
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xne03400
]
XNC1_0747 (sbcD)
DNA repair and recombination proteins [BR:
xne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XNC1_0747 (sbcD)
Archaeal homologous recombinant proteins
XNC1_0747 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
CBJ88818
UniProt:
D3VK66
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All DBs
Position
complement(645885..647102)
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AA seq
405 aa
AA seq
DB search
MKIIHTSDWHLGQYFFTKNRAAEHKHFLQWIIEQIMQHQVDALIIAGDIFDTGSPPSYAR
ELYNKFIVELQPTGCQLVILGGNHDSVAMLNESKALLSYLNTMVIANAETAEIEQQIKVL
NNKDSKPGAILCAIPYLRPRDIMTSQAGQSGTQKQQALQEAITEHYHQLYQQACALREKM
GEPLPIIATGHLTTVGASTTDSVRDIYIGTLDAFPVQAFPPADYIALGHIHRPQVVGKSE
HIRYSGSPIPLSFDEVGQEKSVCLADFKADKLDCITLLPIPCYQPMQIIRGDLKQIKEQL
QAFKEYQGERPVWLDIEVATQDYLPDIQQRIQILSEGLPVEVILLRRRKSTRQSSLAERN
KETLTELSVNEVFERRLALAEIDDIAQKQRLTTLFKQTLDDISQQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcattcatacatccgactggcatcttggccaatatttctttactaaaaaccgc
gccgcagaacataagcattttctacaatggattattgaacaaatcatgcagcatcaggtt
gatgccttaattattgccggcgatatttttgataccggctctcccccaagctatgcacgt
gaactttacaataaattcattgtggagctacagcctacaggctgccagcttgtcattctt
ggcggaaaccacgattccgtcgcgatgctcaatgaatcaaaagccctgctctcttacctg
aacacgatggtgattgccaatgccgaaaccgcagaaatagaacagcaaataaaggtactc
aataataaggatagcaaaccgggggcaattctctgcgcaattccctaccttcgtccgcgg
gatatcatgaccagtcaggccgggcagtctggcactcaaaaacagcaagcactacaggag
gctattactgagcactaccaccagctctatcaacaagcctgcgcattgcgagaaaaaatg
ggtgagccactgccgattattgccacagggcatctcactaccgtaggcgcttccaccacg
gactctgtccgcgatatttacatcggcacactggatgcttttcccgtacaggcatttcca
cctgccgactatattgcactcgggcatatccatcgtcctcaagtcgtcggaaaatcagaa
catattcgctacagtggttcacccattccactgagttttgacgaagtgggtcaggaaaaa
agtgtctgcttagctgactttaaggccgacaaactggattgcatcacgcttttgccaatc
ccttgttatcagcccatgcagattattcgtggcgatttgaagcaaataaaagagcaatta
caggctttcaaagagtatcagggagagcgcccagtctggttggatattgaagtggcgaca
caagattacctaccggatatccaacaacgcatccaaattctgagtgaaggtctgcccgtt
gaagtcattctgttacgccgcagaaaaagtacccgccaatcgtcactggctgaaagaaac
aaagaaaccctcactgaattgagtgtgaatgaagtctttgaacgacgtttggcactggca
gaaattgacgacatagcgcagaaacaacgtctgaccactctgtttaagcaaacgctggat
gatatttctcagcaataa
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